Gene Rru_A0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0721 
Symbol 
ID3834037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp849388 
End bp850062 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID637824806 
Productanti-Sigm factor, ChrR 
Protein accessionYP_425812 
Protein GI83592060 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID[TIGR02451] anti-sigma factor, putative, ChrR family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.699177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGT CCCACCACCC GAGCGAAAGC CTGCTCGCCG CCTATGCGGC GGGAGTCCTG 
GGCGAGGGGG CGAGCCTGAT CGTCGCCGCC CATCTGACCC TCTGCCCGCA TTGCCGGGGT 
GCCGTCGACC ATCTGGAGGC CCTGGGCGGG GCGCTTCTCG AGGAGATGGC CCCCTTGGCT 
TTGGCCGAGG GCGCCCTCGA CGCCGTTCTC GCCCGCCTCG ACACCCCGGC CGCCCCGTCC 
CCGACCCGCG CCACGGCTTC CCGCCTGCCG CCGCCCATGG GCGAGGCGGC CCTGCTGCCC 
GCCCCCTTGC GCCGTCACCT TGCCGATCCT TCGGCCGCCA CCTTGCCGTG GAGGGCGATC 
GCCCCGGGCA TCCGGCAGAT TGCCCTGTTG CCGCGCACCG CCGGCGGAGG CAATGCCCAT 
TTGTTAAAGA TCGCCCCCAA GACCGCCCTT CCCCGGCACG GTCACCATGG GCAGGAATAC 
ACCCTGGTGC TGGCGGGGGC CTTTCAGGAT CGCTCGGAGC GCTTCGCCCG GGGGGATGTC 
GCCGAGGTCG AAGCCGACAG GGTCCACCAA CCGATCACCG ACGGCCAGGA TTGCCTGTGT 
CTGGTCGTGA CAGAAGGCCC TTTGCGCTAC ATGGGCATGA TCCCGCGCCT GATGCAGCCC 
TTCACCGGTT TCTAA
 
Protein sequence
MTLSHHPSES LLAAYAAGVL GEGASLIVAA HLTLCPHCRG AVDHLEALGG ALLEEMAPLA 
LAEGALDAVL ARLDTPAAPS PTRATASRLP PPMGEAALLP APLRRHLADP SAATLPWRAI 
APGIRQIALL PRTAGGGNAH LLKIAPKTAL PRHGHHGQEY TLVLAGAFQD RSERFARGDV 
AEVEADRVHQ PITDGQDCLC LVVTEGPLRY MGMIPRLMQP FTGF