| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0719 |
|---|
| Symbol | |
|---|
| ID | 3834035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 847991 |
|---|
| End bp | 848746 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637824804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_425810 |
|---|
| Protein GI | 83592058 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0507397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCTGCA AGGGCGCCCG CAGGCTACTT GGGTGGGGAG GGGTGGCCGC GCTGCTTGGC
CTTGGCTGCC TTCCCGCCCT GGCCGCGGCC GATCCGCCGG CGCCGACCCA CCGGCTTGTC
GTGTCATCGA CCTATTGGCC TCCCTATGCC GGATCAGGAT TGCCCGACGG GGGAACGGTC
GTCGCTCCGA TCGCCGCCGC CTTGCGCGAG ATCGGGGTGA TTCTGGAGGT CATCTATGTT
CCCTGGCCGC GCGCGGTCAG CCTGTTTGCC GAAGGCGATG TCGATGGCTT CCTGCCGACC
TATGATCGCC ATGGTCAATC CTGTCAGCTG TCCGAGCCGG TTCTTGACAC GGTGCTCGGG
TTCGTCGAAC GGGTCGACGC GCCGGTTCGC TGGGCGTCGT TGAGCGATCT CGCCGGTCTG
CGGATCGGGT CGGTCTTGGG CTATTCGAAT TCGCCCGAGT TCGACCGCCT GGTCGCCAGC
GGGGTGCTGA CCACCGAGGT GGTGACGAAT GATCTTCGCA ATGTTCTGAA GGTTGCCGCC
GGACGGCTGG CCCTGGCCAT CATCGATCGC GATGTGTTCG ATCACCTGAT GGCCCATGAC
CCTGAAGCGC GGGCGGTGGC CCATCAGGTG CGCTTCAGCC GGCGGGTTTT GGCGATCCGG
CCGATTTTTC TTTGCCTGCG CGCCTCGGAG AGCATGGCCG AGGTCCTCGC CCGGATCAAT
CGCGCCTTGC GTTTTCAGAC CTTGGGCGAT CCGTGA
|
|---|
| Protein sequence | MICKGARRLL GWGGVAALLG LGCLPALAAA DPPAPTHRLV VSSTYWPPYA GSGLPDGGTV
VAPIAAALRE IGVILEVIYV PWPRAVSLFA EGDVDGFLPT YDRHGQSCQL SEPVLDTVLG
FVERVDAPVR WASLSDLAGL RIGSVLGYSN SPEFDRLVAS GVLTTEVVTN DLRNVLKVAA
GRLALAIIDR DVFDHLMAHD PEARAVAHQV RFSRRVLAIR PIFLCLRASE SMAEVLARIN
RALRFQTLGD P
|
|---|
| |