| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0697 |
|---|
| Symbol | |
|---|
| ID | 3833934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 826246 |
|---|
| End bp | 827652 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637824782 |
|---|
| Product | multi anti extrusion protein MatE |
|---|
| Protein accession | YP_425788 |
|---|
| Protein GI | 83592036 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.596572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTTCCT CATCGGTTTC CTTGCCACGG TCGGGCCATG GAGCATGGCG GACCGAATTG
GGCGCCACCT TGTCGCTCGC TTGGCCGCTG ATCCTGACCA ATCTGGCCCA GGCGGCGCTG
ACCACCACCG ATCTTTTGCT GATCGGCAGC CTGGGGTCGC GGTCCCTGGC CGCCGCCGCC
ATGGCCGCCG GCCTGTTTCA GGCGCTGATG CTGTTCGGCC TGGGGCTGGT CTCGGCGACC
TTGCCGCTGC TGGCCACGGC TTTGGGCCGC AACCGTCATA GCGTGCGCGA TGTGCGGCGC
ACCGTGCGCC AGGGCCTATG GTCGGCGGGG CTGATCAGCC TGCCGCTGTG GCTGATCCTT
TGGCATACGG AGGCGGTGCT GATCGCCTTT GGTCAGGAGC CCGCCCTGGC GGCCGAGGCG
GCCGGTTTCA TGCATACCCT GCAATGGGGG CTGCTGCCCT TCCTCGGCTA TATCGTGCTG
CGCGCCTTTC TTTCGGCGTT GGAACGGCCG ATGTGGCCCT TGCTGGTCGC CGGATTGGCC
ATCGGCTTCA ACGCCCTGGC GGCCTGGGCG CTGATCTTCG GCCACCTTGG CCTGCCGGCC
CTGGGGCTGC CCGGGGCCGG GGTGTCGAGC AGCCTGTCGA GCCTGTTCAT GGTTGCCGGG
CTGGCCCTGG TCATCACCCG CCAGCGCCGC CTGAAGCGCT ACCGGCTGTT TGGCCGCTTC
TGGCGGCCCG ATTGGCCACG TCTGGTCACC CTGTGGCGCC TGGGTTTGCC GATGGCGATC
AGTTTCGCCT TCGAGGTGTC GATCTTCCAG GCCTCGATGA TGATGATGGG CATTCTGGGG
GCGGACGCCC TGGCCGCCCA TACCATCGCC CTGCAAATCG CCACGCTGAC CTTCATGGTG
CCCCTGGGGC TGGGGCAGGC GGCGACGGTG CGGGTCGGGC GGGCGCTGGG AGCGGGCACC
ATTCCGGCCC TGCGCCGCGC CGGCTGGGTG GCCTATGGCG CCGGCGTCGC CTTCATGGGC
GGGGCGGCCC TGATGATGCT CAGCGTGCCC CGGTTGCTGA TCGGCGCTTT CCTGGATGCC
GATCTGGCCG AAAACGCCCC GGTGATCGAT CTGGCGGTGG TGCTGATGGC CCTGGCCGCG
CTGTTCCAGA TCGCCGATGG CGCCCAGGCG GTGTGCAACG GCATGCTGCG CGGCCTGCAT
GACACCAAGG TGCCGATGCT GCTGGCCGCC CTGGGCTATT GGGGCTTGGG CCTGCCCTTG
GGCGCCTTGC TCGCCTTCCC TTTGGGGGTG GGCGCGCCCG GCGTGTGGAT CGGGCTGGCC
GGCGGGCTTT CGGTGGTGGC CGTGCTGATG ACCCGGCGCT GGATCCGTCT GGTCGCCGCC
CTGGAACGCG CCAGCGTGAC CGCTTAG
|
|---|
| Protein sequence | MISSSVSLPR SGHGAWRTEL GATLSLAWPL ILTNLAQAAL TTTDLLLIGS LGSRSLAAAA
MAAGLFQALM LFGLGLVSAT LPLLATALGR NRHSVRDVRR TVRQGLWSAG LISLPLWLIL
WHTEAVLIAF GQEPALAAEA AGFMHTLQWG LLPFLGYIVL RAFLSALERP MWPLLVAGLA
IGFNALAAWA LIFGHLGLPA LGLPGAGVSS SLSSLFMVAG LALVITRQRR LKRYRLFGRF
WRPDWPRLVT LWRLGLPMAI SFAFEVSIFQ ASMMMMGILG ADALAAHTIA LQIATLTFMV
PLGLGQAATV RVGRALGAGT IPALRRAGWV AYGAGVAFMG GAALMMLSVP RLLIGAFLDA
DLAENAPVID LAVVLMALAA LFQIADGAQA VCNGMLRGLH DTKVPMLLAA LGYWGLGLPL
GALLAFPLGV GAPGVWIGLA GGLSVVAVLM TRRWIRLVAA LERASVTA
|
|---|
| |