| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0671 |
|---|
| Symbol | |
|---|
| ID | 3834309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 793740 |
|---|
| End bp | 794792 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637824755 |
|---|
| Product | cobalamin synthesis CobW protein |
|---|
| Protein accession | YP_425762 |
|---|
| Protein GI | 83592010 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | [TIGR02475] cobalamin biosynthesis protein CobW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTT CCGCCCGCCA TGCCCCCCGC CGCATTCCCG CCACCGTGAT CACCGGCTTT
CTGGGGGCGG GCAAGACCAC CCTGGTGCGT CATTTGATGG AACATGCCGG CGGCCGACGC
ATCGCCCTGA TCATCAATGA ATTCGGCGAT GTCGGCATGG ACCGCGAGAT CCTGGCGGCC
TGCGGCGTCG CCGGCTGCGC CGAGGATGAC ATCGTCGAAC TGGCCAATGG CTGCATCTGC
TGCACGGTGG CCGATGAATT CCTGCCGACG ATGGAGGCGC TGCTCGCCCG GCCGCAGCCG
CCCGAGCATA TCATCATCGA AACCTCGGGC CTCGCCCTGC CCAAGCCGCT GGTCCGCGCC
TTTGATTGGC CCGACGTGCG GGCGCGGGTA ACGGTGGACG GGGTGGTGGC GGTGGTCGAC
GCCCGCTCGG TCCACGATGG CCGCTTCACC GAGGATCCGG CCGGTCTGGC GGCGCGCCGG
GCCGCCGATC CGGCGCTTGA TCACGACAAT CCGCTGGAAG AGGTTTTCGA GGATCAGTTG
CTGTGCGCCG ATATGGTCGT GCTCAACAAG GTCGATCTGC TGAGCGAGGC CGAGACGGCG
GCGCTGATCG CCGAGCTGGG CGGCCGCCTG CGCCCGGGCA CCCGGCTGGT GCCCGTGGTC
GAGGGCCGGG TCGATCCCGC CGTGGCCCTT GGCCTGATGG CCGGGGTGGA GGACGACCTT
GAGGGCCGCC CCAGCCACCA CGATACGGCG ACCGATCACG ACCACGACGA TTTCCACAGC
TTCGTCGTTG GCCTGGGCGC CGTGGCCGAT CCGGCCGAGG CCCGCCAGCG CCTGGGCGCG
GTGATCGCCG ATCACGACAT CTTGCGCATC AAGGGATTTT TGGCGGTGCC GGGCAAGCCG
ATGCGCCATC TGATCCAGGC GGTCGGCCCG CGGGTTTCGG GCTATTACGA CCGGCCGTGG
CGGGACGACG AGGCCCGCGA ATCGCGATTG GTGGTGATCG GCCTGCGCGG ATTGGACGAG
GCGGCGATTC GCGGCGCCCT GGTCGGCCTG TAA
|
|---|
| Protein sequence | MSVSARHAPR RIPATVITGF LGAGKTTLVR HLMEHAGGRR IALIINEFGD VGMDREILAA
CGVAGCAEDD IVELANGCIC CTVADEFLPT MEALLARPQP PEHIIIETSG LALPKPLVRA
FDWPDVRARV TVDGVVAVVD ARSVHDGRFT EDPAGLAARR AADPALDHDN PLEEVFEDQL
LCADMVVLNK VDLLSEAETA ALIAELGGRL RPGTRLVPVV EGRVDPAVAL GLMAGVEDDL
EGRPSHHDTA TDHDHDDFHS FVVGLGAVAD PAEARQRLGA VIADHDILRI KGFLAVPGKP
MRHLIQAVGP RVSGYYDRPW RDDEARESRL VVIGLRGLDE AAIRGALVGL
|
|---|
| |