Gene Rru_A0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0656 
Symbol 
ID3834294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp775762 
End bp779472 
Gene Length3711 bp 
Protein Length1236 aa 
Translation table11 
GC content69% 
IMG OID637824740 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_425747 
Protein GI83591995 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATC TAGCCAGCCT GCGTTTGTCT TTGCGTCGTG AACCTTTGCG GGACGAGGCG 
GCGGTCGTCG CCGACCGTCT CGCCGCCCTG CCGCTCGATG CCGACCGCCG TCAGGCGGTG
TCCGAGGCCG GGCGGGCCCT GGTCGAACGG ATGCGGGCCT CGGGCGAGGT CACGATGATG
GACAACATGC TGGCCGAATA CGGCCTGTCC ACCGACGAGG GCGTCGCCCT GATGTGTCTG
GCCGAGGCCT ATTTGCGCGT TCCCGACGCC CCCACCCTCG ATGCCCTGAT CAAGGACAAG
ATCGGCGGCC GCGACTGGGC CGAGCACGCT GGCGAAAGCG GCTCGATGCT GGTCAACGCC
TCGACCTGGG GGCTGATGTT CACCGGCCGG CTTTATGGGG AAAGCTGGGC CGAGGATACC
TTGTTGGGAT CGGTGCGCAA GATGGTGCGC CGGGTCGGCG AGCCGGTGGT GCGCACCGCC
GTTGCCCAAT GCATGAAGAT CATGGGCGCC CAGTTCGTTC TGGGGCGGAC GATCGACGAG
GCGTGGAGGA ACGGCGGGCC GCTGATCGAG AAGGGCTATA CCTATTCCTT CGACATGCTG
GGCGAGGCCG CCCGCACCGC CGCCGACGCC ACCCATTATT TCAAGGCCTA TGCCAATGCC
ATCGCCGCCG TCGGCGCGCG GGCGACCCAG GCCGATGTCC ATGCCAATTC GGGCATCTCG
GTCAAGCTGT CGGCCCTGCA TCCGCGCTAT GAGGAGGTCA ACCGCGCCCG GGTGATGGCC
GAACTGGTCC CCCGGCTGTC GGCCCTGGCC GAGATGGCGG CGGCGGTCAA TGTCGGCATG
ACGGTGGACG CCGAGGAGGC CGATCGCCTG GATCTGTCGC TTTCGGTGAT GGAGGCGGTG
CTGCGCAATC CCAATCTGGC GGGATGGGGC GGCTTTGGTA TCGTCGTCCA GGCCTATCTG
AAAAGCACCC TGCCGACCAT CGACTGGATC ATCGCCCTGG CCCGCGACCT CGATCGCCAA
CTGGCGGTGC GGCTGGTCAA GGGCGCCTAT TGGGACGCCG AGATTAAGAC CGCCCAAAGC
CTCGCCCTGC CGGCCTATCC GGTGTTCACC CGCAAGGCCT CGACCGATGT GTCCTATATG
GCCTCGGCCG CCCGGCTGCT AGGCGCCCAG GACCATATCT ATCCGATGTT CGCCGGCCAT
AACGCCCATA CCGCCTCGGC GGTGCTGGAA ATGGCCGGAC CGGACGCGGT GTTCGAGTTC
CAGCGCCTGC ATGGCATGGG CGAAACCCTG CATGAGCTGC TGCGCCGCGA TCATGGTCAC
CGCTGCCGCA TCTATGCTCC GGTCGGCGTT CACAAGGATT TGCTGGCCTA TCTGGTGCGC
CGCCTTTTGG AAAACGGCGC CAATAGCAGC TTCGTCAATC AGGCCCTTGA TAAGGACGTG
CCGGCCGCCG AGCTGACCCG CGATCCGGCG ACGGTGGTGG CCCAGGCCTC TTCGGTCGCC
CATGCCGGCA TTCCGCTGCC GCCCGCCCTG TTCGGTGCCG AGCGGGCCAA TTCCAAGGGC
TGGAACCTGA ATAATCCGCT GATGGCCGCC GAGTTGGACG AGCGCCTGAC GCCCTTCCGC
GCCGCGCGTT GGTCGGCCGC GCCGATGATC GGCGCGACGC CGCCGCGCTC GGGTGGCGAG
GCGGTGACCA ATCCCGCCGA CCGCGACGAA ACCGTGGGCT TCGTGGTGAG CGCGACGGCG
AACGATGTCA CCGTGGCCCT GGAAACAACG ACGCGGGCCT TCCCCAACTG GCGCGACCGG
GCGCCGGCCG AGCGGGCCGC CCTCCTTGAC CGCATCGCCG CGCTCTATGA GGAACACGCC
CCCGAACTGA TCGCCCTGCT CAGCCGCGAA GCCGGCAAGA CGCGCTGGGA CGGCATTTTG
GAAGTGCGCG AGGCGGTGGA TTTCTGCCGT TATTACGCGG CGCGAAGCCG GGCCGATCTG
GCCGGCAGCG GTCGTAAGGG GCGCGGCGTG TTCGTCTGCA TCTCGCCCTG GAACTTCCCG
CTGGCGATCT TCACTGGCCA GATCGCCGCC GCCCTGGTCA GCGGCAACAC GGTGATCGCC
AAGCCGGCCG AGCAGACGCC GCTGATCGCC GCCCGCGCCG TGGCCCTGAT GCGCGAGGCG
GGGGTGCCGC CCGAGGTTTT GGCCCTGCTG CCCGGCGAGG GTGCCAGCGT CGGCGCGGCG
CTGACCGCCA GTCCCTTGGT CGCCGGCGTC TGCTTCACCG GATCGACCGA GACCGCCATC
GCCATCGACC GCGCCCAGGC TTCAGCCGGC ACGGGCGGGG CGCCGCTGAT CGCCGAGACC
GGCGGCCTCA ACGCCATGAT CGTTGATTCC ACCGCCCTGC CCGAACATGC GGTGCGCGAT
ATCGTCGCCG GCGCCTTCCA AAGCGCCGGA CAGCGCTGTT CGGCCCTGCG CGCCCTCTTC
GTGCAAGAAG ACATCGCCGA CCACCTGCTG ACCATGCTGG CCGGGGCGGT CCAGGAACTG
GTGGTGGGCA ATCCGTGGGA GGCGGTCACC GATGTCGGCC CGGTGATCGA TGCCGAGGCC
AAGGCGGTGA TCACCCGCCA TTGCGAGGCC CTGACGGCGG CCGGACGGCG GCTGTTCGTC
CACGACAAGG CCAAGGCGGC CAAGGGCGGC GGCTTTGTTG CCCCCGTCGC CTTCTCGCTC
GATCGCTTCG AGGATCTGAA GAGCGAGATC TTCGGCCCGG TGCTTCATGT CATCCGCTTC
CGCAATACCG AGATCGACGC CGTTGTCGAC AGCATCAACG CCGCTGGGTA TGGCCTGACC
CTGGGGATCC ACAGCCGGGT CGACGCCCAG GTCGAACGCA TCTGCAGCCG GGCCCGGGTT
GGCAATATCT ATGTCAACCG CAACCAGATC GGCGCGGTGG TCGGTGTCCA GCCCTTCGGC
GGCGAAGGGC TGTCGGGAAC CGGCCCCAAG GCCGGCGGTC CGGGCTATCT GGAGCGCTTC
ACCATCGCCG CCCCGGTCGC CCTGCCCGAA GTCGCCTTGC CGGCCTCCCA TGGCGAGGAC
GCCGCGGCCG AGAATGCCCT GGACGCCGCG CGCTGGGCGG CCTCCGTCCA GCCGGCCTGG
GACGGGCGGA GCGATCGTCT GGCCATTCTG GAAGCGGCCC TGCGTGCCCT GCCCGAGGCC
GCCCGCCCGA CGGCGAGCGC GGTTCTGGAC CTAGCCAAGC CGCTGGTCGC CCCGCCGCTG
GATCTGGTGG GGGTGACCGG GGAAAGCAAC CGGTTGGCCC TGCATGGGCG TGGCGTGGTT
CTGTGCCTGG GCGGCGGCGA GCGGCCGGCG ACGGCGCTGC TGGCCCAGGC GCTGCTGGGC
TTGGCGGCGG GTAACGCGGT GCTGCTGGCC GGGGATCCGG GGGCAGGGGT GATCGCCGCC
CTGCGCAAGG CCCTGGCCGA GGCCGGGCTT TCGGCTGGGC TGGTTCAATC GATCGTCGCC
AGCGATCTTC CTGGGCTGCT GCGCGAGATG CCACGTCTGG CCCTGGTCGC CCATGAGGGC
GGCGTCGGTG GTGAAGGCCT GCGCGTCGCC CTGGCGGCGC GGTCGGGGGC CCGCGTGCCA
CTAGTCGCCC TGGTCGATGG CGTCGGCCGC TATGTGAGCG AACGGGTGGT GTCGATCGAC
ACCACCGCCT CGGGCGGCAA TGCCAGCCTG CTGATGCTCG ACGAAGGATA A
 
Protein sequence
MSDLASLRLS LRREPLRDEA AVVADRLAAL PLDADRRQAV SEAGRALVER MRASGEVTMM 
DNMLAEYGLS TDEGVALMCL AEAYLRVPDA PTLDALIKDK IGGRDWAEHA GESGSMLVNA
STWGLMFTGR LYGESWAEDT LLGSVRKMVR RVGEPVVRTA VAQCMKIMGA QFVLGRTIDE
AWRNGGPLIE KGYTYSFDML GEAARTAADA THYFKAYANA IAAVGARATQ ADVHANSGIS
VKLSALHPRY EEVNRARVMA ELVPRLSALA EMAAAVNVGM TVDAEEADRL DLSLSVMEAV
LRNPNLAGWG GFGIVVQAYL KSTLPTIDWI IALARDLDRQ LAVRLVKGAY WDAEIKTAQS
LALPAYPVFT RKASTDVSYM ASAARLLGAQ DHIYPMFAGH NAHTASAVLE MAGPDAVFEF
QRLHGMGETL HELLRRDHGH RCRIYAPVGV HKDLLAYLVR RLLENGANSS FVNQALDKDV
PAAELTRDPA TVVAQASSVA HAGIPLPPAL FGAERANSKG WNLNNPLMAA ELDERLTPFR
AARWSAAPMI GATPPRSGGE AVTNPADRDE TVGFVVSATA NDVTVALETT TRAFPNWRDR
APAERAALLD RIAALYEEHA PELIALLSRE AGKTRWDGIL EVREAVDFCR YYAARSRADL
AGSGRKGRGV FVCISPWNFP LAIFTGQIAA ALVSGNTVIA KPAEQTPLIA ARAVALMREA
GVPPEVLALL PGEGASVGAA LTASPLVAGV CFTGSTETAI AIDRAQASAG TGGAPLIAET
GGLNAMIVDS TALPEHAVRD IVAGAFQSAG QRCSALRALF VQEDIADHLL TMLAGAVQEL
VVGNPWEAVT DVGPVIDAEA KAVITRHCEA LTAAGRRLFV HDKAKAAKGG GFVAPVAFSL
DRFEDLKSEI FGPVLHVIRF RNTEIDAVVD SINAAGYGLT LGIHSRVDAQ VERICSRARV
GNIYVNRNQI GAVVGVQPFG GEGLSGTGPK AGGPGYLERF TIAAPVALPE VALPASHGED
AAAENALDAA RWAASVQPAW DGRSDRLAIL EAALRALPEA ARPTASAVLD LAKPLVAPPL
DLVGVTGESN RLALHGRGVV LCLGGGERPA TALLAQALLG LAAGNAVLLA GDPGAGVIAA
LRKALAEAGL SAGLVQSIVA SDLPGLLREM PRLALVAHEG GVGGEGLRVA LAARSGARVP
LVALVDGVGR YVSERVVSID TTASGGNASL LMLDEG