Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0656 |
Symbol | |
ID | 3834294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 775762 |
End bp | 779472 |
Gene Length | 3711 bp |
Protein Length | 1236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637824740 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_425747 |
Protein GI | 83591995 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATC TAGCCAGCCT GCGTTTGTCT TTGCGTCGTG AACCTTTGCG GGACGAGGCG GCGGTCGTCG CCGACCGTCT CGCCGCCCTG CCGCTCGATG CCGACCGCCG TCAGGCGGTG TCCGAGGCCG GGCGGGCCCT GGTCGAACGG ATGCGGGCCT CGGGCGAGGT CACGATGATG GACAACATGC TGGCCGAATA CGGCCTGTCC ACCGACGAGG GCGTCGCCCT GATGTGTCTG GCCGAGGCCT ATTTGCGCGT TCCCGACGCC CCCACCCTCG ATGCCCTGAT CAAGGACAAG ATCGGCGGCC GCGACTGGGC CGAGCACGCT GGCGAAAGCG GCTCGATGCT GGTCAACGCC TCGACCTGGG GGCTGATGTT CACCGGCCGG CTTTATGGGG AAAGCTGGGC CGAGGATACC TTGTTGGGAT CGGTGCGCAA GATGGTGCGC CGGGTCGGCG AGCCGGTGGT GCGCACCGCC GTTGCCCAAT GCATGAAGAT CATGGGCGCC CAGTTCGTTC TGGGGCGGAC GATCGACGAG GCGTGGAGGA ACGGCGGGCC GCTGATCGAG AAGGGCTATA CCTATTCCTT CGACATGCTG GGCGAGGCCG CCCGCACCGC CGCCGACGCC ACCCATTATT TCAAGGCCTA TGCCAATGCC ATCGCCGCCG TCGGCGCGCG GGCGACCCAG GCCGATGTCC ATGCCAATTC GGGCATCTCG GTCAAGCTGT CGGCCCTGCA TCCGCGCTAT GAGGAGGTCA ACCGCGCCCG GGTGATGGCC GAACTGGTCC CCCGGCTGTC GGCCCTGGCC GAGATGGCGG CGGCGGTCAA TGTCGGCATG ACGGTGGACG CCGAGGAGGC CGATCGCCTG GATCTGTCGC TTTCGGTGAT GGAGGCGGTG CTGCGCAATC CCAATCTGGC GGGATGGGGC GGCTTTGGTA TCGTCGTCCA GGCCTATCTG AAAAGCACCC TGCCGACCAT CGACTGGATC ATCGCCCTGG CCCGCGACCT CGATCGCCAA CTGGCGGTGC GGCTGGTCAA GGGCGCCTAT TGGGACGCCG AGATTAAGAC CGCCCAAAGC CTCGCCCTGC CGGCCTATCC GGTGTTCACC CGCAAGGCCT CGACCGATGT GTCCTATATG GCCTCGGCCG CCCGGCTGCT AGGCGCCCAG GACCATATCT ATCCGATGTT CGCCGGCCAT AACGCCCATA CCGCCTCGGC GGTGCTGGAA ATGGCCGGAC CGGACGCGGT GTTCGAGTTC CAGCGCCTGC ATGGCATGGG CGAAACCCTG CATGAGCTGC TGCGCCGCGA TCATGGTCAC CGCTGCCGCA TCTATGCTCC GGTCGGCGTT CACAAGGATT TGCTGGCCTA TCTGGTGCGC CGCCTTTTGG AAAACGGCGC CAATAGCAGC TTCGTCAATC AGGCCCTTGA TAAGGACGTG CCGGCCGCCG AGCTGACCCG CGATCCGGCG ACGGTGGTGG CCCAGGCCTC TTCGGTCGCC CATGCCGGCA TTCCGCTGCC GCCCGCCCTG TTCGGTGCCG AGCGGGCCAA TTCCAAGGGC TGGAACCTGA ATAATCCGCT GATGGCCGCC GAGTTGGACG AGCGCCTGAC GCCCTTCCGC GCCGCGCGTT GGTCGGCCGC GCCGATGATC GGCGCGACGC CGCCGCGCTC GGGTGGCGAG GCGGTGACCA ATCCCGCCGA CCGCGACGAA ACCGTGGGCT TCGTGGTGAG CGCGACGGCG AACGATGTCA CCGTGGCCCT GGAAACAACG ACGCGGGCCT TCCCCAACTG GCGCGACCGG GCGCCGGCCG AGCGGGCCGC CCTCCTTGAC CGCATCGCCG CGCTCTATGA GGAACACGCC CCCGAACTGA TCGCCCTGCT CAGCCGCGAA GCCGGCAAGA CGCGCTGGGA CGGCATTTTG GAAGTGCGCG AGGCGGTGGA TTTCTGCCGT TATTACGCGG CGCGAAGCCG GGCCGATCTG GCCGGCAGCG GTCGTAAGGG GCGCGGCGTG TTCGTCTGCA TCTCGCCCTG GAACTTCCCG CTGGCGATCT TCACTGGCCA GATCGCCGCC GCCCTGGTCA GCGGCAACAC GGTGATCGCC AAGCCGGCCG AGCAGACGCC GCTGATCGCC GCCCGCGCCG TGGCCCTGAT GCGCGAGGCG GGGGTGCCGC CCGAGGTTTT GGCCCTGCTG CCCGGCGAGG GTGCCAGCGT CGGCGCGGCG CTGACCGCCA GTCCCTTGGT CGCCGGCGTC TGCTTCACCG GATCGACCGA GACCGCCATC GCCATCGACC GCGCCCAGGC TTCAGCCGGC ACGGGCGGGG CGCCGCTGAT CGCCGAGACC GGCGGCCTCA ACGCCATGAT CGTTGATTCC ACCGCCCTGC CCGAACATGC GGTGCGCGAT ATCGTCGCCG GCGCCTTCCA AAGCGCCGGA CAGCGCTGTT CGGCCCTGCG CGCCCTCTTC GTGCAAGAAG ACATCGCCGA CCACCTGCTG ACCATGCTGG CCGGGGCGGT CCAGGAACTG GTGGTGGGCA ATCCGTGGGA GGCGGTCACC GATGTCGGCC CGGTGATCGA TGCCGAGGCC AAGGCGGTGA TCACCCGCCA TTGCGAGGCC CTGACGGCGG CCGGACGGCG GCTGTTCGTC CACGACAAGG CCAAGGCGGC CAAGGGCGGC GGCTTTGTTG CCCCCGTCGC CTTCTCGCTC GATCGCTTCG AGGATCTGAA GAGCGAGATC TTCGGCCCGG TGCTTCATGT CATCCGCTTC CGCAATACCG AGATCGACGC CGTTGTCGAC AGCATCAACG CCGCTGGGTA TGGCCTGACC CTGGGGATCC ACAGCCGGGT CGACGCCCAG GTCGAACGCA TCTGCAGCCG GGCCCGGGTT GGCAATATCT ATGTCAACCG CAACCAGATC GGCGCGGTGG TCGGTGTCCA GCCCTTCGGC GGCGAAGGGC TGTCGGGAAC CGGCCCCAAG GCCGGCGGTC CGGGCTATCT GGAGCGCTTC ACCATCGCCG CCCCGGTCGC CCTGCCCGAA GTCGCCTTGC CGGCCTCCCA TGGCGAGGAC GCCGCGGCCG AGAATGCCCT GGACGCCGCG CGCTGGGCGG CCTCCGTCCA GCCGGCCTGG GACGGGCGGA GCGATCGTCT GGCCATTCTG GAAGCGGCCC TGCGTGCCCT GCCCGAGGCC GCCCGCCCGA CGGCGAGCGC GGTTCTGGAC CTAGCCAAGC CGCTGGTCGC CCCGCCGCTG GATCTGGTGG GGGTGACCGG GGAAAGCAAC CGGTTGGCCC TGCATGGGCG TGGCGTGGTT CTGTGCCTGG GCGGCGGCGA GCGGCCGGCG ACGGCGCTGC TGGCCCAGGC GCTGCTGGGC TTGGCGGCGG GTAACGCGGT GCTGCTGGCC GGGGATCCGG GGGCAGGGGT GATCGCCGCC CTGCGCAAGG CCCTGGCCGA GGCCGGGCTT TCGGCTGGGC TGGTTCAATC GATCGTCGCC AGCGATCTTC CTGGGCTGCT GCGCGAGATG CCACGTCTGG CCCTGGTCGC CCATGAGGGC GGCGTCGGTG GTGAAGGCCT GCGCGTCGCC CTGGCGGCGC GGTCGGGGGC CCGCGTGCCA CTAGTCGCCC TGGTCGATGG CGTCGGCCGC TATGTGAGCG AACGGGTGGT GTCGATCGAC ACCACCGCCT CGGGCGGCAA TGCCAGCCTG CTGATGCTCG ACGAAGGATA A
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Protein sequence | MSDLASLRLS LRREPLRDEA AVVADRLAAL PLDADRRQAV SEAGRALVER MRASGEVTMM DNMLAEYGLS TDEGVALMCL AEAYLRVPDA PTLDALIKDK IGGRDWAEHA GESGSMLVNA STWGLMFTGR LYGESWAEDT LLGSVRKMVR RVGEPVVRTA VAQCMKIMGA QFVLGRTIDE AWRNGGPLIE KGYTYSFDML GEAARTAADA THYFKAYANA IAAVGARATQ ADVHANSGIS VKLSALHPRY EEVNRARVMA ELVPRLSALA EMAAAVNVGM TVDAEEADRL DLSLSVMEAV LRNPNLAGWG GFGIVVQAYL KSTLPTIDWI IALARDLDRQ LAVRLVKGAY WDAEIKTAQS LALPAYPVFT RKASTDVSYM ASAARLLGAQ DHIYPMFAGH NAHTASAVLE MAGPDAVFEF QRLHGMGETL HELLRRDHGH RCRIYAPVGV HKDLLAYLVR RLLENGANSS FVNQALDKDV PAAELTRDPA TVVAQASSVA HAGIPLPPAL FGAERANSKG WNLNNPLMAA ELDERLTPFR AARWSAAPMI GATPPRSGGE AVTNPADRDE TVGFVVSATA NDVTVALETT TRAFPNWRDR APAERAALLD RIAALYEEHA PELIALLSRE AGKTRWDGIL EVREAVDFCR YYAARSRADL AGSGRKGRGV FVCISPWNFP LAIFTGQIAA ALVSGNTVIA KPAEQTPLIA ARAVALMREA GVPPEVLALL PGEGASVGAA LTASPLVAGV CFTGSTETAI AIDRAQASAG TGGAPLIAET GGLNAMIVDS TALPEHAVRD IVAGAFQSAG QRCSALRALF VQEDIADHLL TMLAGAVQEL VVGNPWEAVT DVGPVIDAEA KAVITRHCEA LTAAGRRLFV HDKAKAAKGG GFVAPVAFSL DRFEDLKSEI FGPVLHVIRF RNTEIDAVVD SINAAGYGLT LGIHSRVDAQ VERICSRARV GNIYVNRNQI GAVVGVQPFG GEGLSGTGPK AGGPGYLERF TIAAPVALPE VALPASHGED AAAENALDAA RWAASVQPAW DGRSDRLAIL EAALRALPEA ARPTASAVLD LAKPLVAPPL DLVGVTGESN RLALHGRGVV LCLGGGERPA TALLAQALLG LAAGNAVLLA GDPGAGVIAA LRKALAEAGL SAGLVQSIVA SDLPGLLREM PRLALVAHEG GVGGEGLRVA LAARSGARVP LVALVDGVGR YVSERVVSID TTASGGNASL LMLDEG
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