Gene Rru_A0595 details

Gene Information

• Locus tag: Rru_A0595
• ID: 3833968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 706239
• End bp: 708221
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637824679
• Product: transketolase
• Protein accession: YP_425686
• Protein GI: 83591934
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCCG TCCCCCACGC CGATCTCGCC AACGCCATCC GCTTTCTGTC CGCCGATGCG 
GTTCAAAAGG CCAAATCCGG CCACCCCGGC ATGCCCATGG GCATGGCCGA TGTGGCGACG 
GTTCTGTTCA CCCGGTTCCT GACCTTTGAT CCGGCGGCGC CGCGCTGGCC CGACCGCGAC 
CGCTTCGTGC TGTCGGCCGG CCATGGCTCG ATGCTGCTCT ACAGCCTGCT TTACCTCACC 
GGCTATGCCG ATATCGATCT TGATCAGATC AAGTCGTTCC GCCAGCTTGG CGCGCGTACC 
GCCGGCCACC CGGAATACGG CCATGTGGCC GGCGCCGAGA CCACCACCGG GCCGCTGGGC 
CAGGGGCTGG CCAACGCCGT GGGCATGGCC CTGGCCGAGC GCATGACCGC CGCCCGCTTC 
GGCGAGGCCG TGGTCAACCA CCGCACCTAT GTGATCGCCG GCGACGGCTG CCTGATGGAA 
GGCATCAGCC AGGAGGCCAT CTCGCTGGCC GGGCACATGA AGCTCGAACG GCTGATCGTG 
TTGTGGGACG ACAACCGCAT CTGCATCGAC GGCGATGTCG GTCTGGCGTC GAGCGACGAC 
GTTCCCGCCC GCTTCCAGGC CAGCGGCTGG CGCACCCTGG CCTGCGACGG CCATGACCCC 
CAGGATATTA CCCGGGCCCT GACCGAGGCC CAGACCTCGG ACCGGCCGAC GCTGATCGCC 
TGCCGCACCA TCATCGGCAA GGGCGCGCCC ACCCTTCAGG GCACCGCCAA GACCCATGGC 
TCGCCGCTGG GCGATGCCGA GATCGCCGGC GCCCGCGCCG CGCTCGGCTG GCCCCATGCC 
CCCTTCGAGG TGCCCGAGCC CATCTTGTCG GCTTGGCGGA CCGCCGGCGC CCGCGGCGGG 
GTTGCCCGCG TTGCCTGGGA AGACCGTCTG GCCTCGCTGC CCGGCGACGA GCGCGCCACC 
CTCATCCGCG CCCTGGCCGG TGATCTGCCG GCGGGCTGGG AAGACGCCGT CCTCGCCGCC 
AAGCGCGCCC TGATCGAGAC CCGGCCCAAG GTCGCCTCGC GCAAGGCCTC GCAGATGGCG 
CTCGAGGTTC TGGTGCCGCA GATCCCCGAA CTGGTCGGCG GCTCGGCCGA CTTGACGGGC 
TCCAACCTCA CCCAGGTCAA GGGTCAGGCC GATATCCTGC CCGGCTCCTA TGGCGGCCAT 
TACATCCACT ATGGCGTGCG CGAGCATGGC ATGGGCTCGC TGATGAACGG TTTGGCCCTG 
CATGGCGGGG TCATCCCCTA TGGCGGCACC TTCCTGGTCT TCGCCGATTA CATGCGCCCG 
GCCATCCGCA TGGCCGCCCT GATGGGCCTG CGCGCCATTT ATGTGCTGAC CCATGATTCC 
ATCGGTCTGG GCGAAGACGG CCCGACCCAT CAGCCGGTCG AGCATCTGGC CTCGTTGCGC 
GCCATTCCCA ACCTGTGGAC CTTCCGCCCG GCCGATGCGG TGGAAACCCT GGAATGCTGG 
GCCCTGGCCG TCGGTCGCAG CGATGGCCCG AGCCTGCTCG CCCTGTCGCG TCAGGATCTG 
CCGACCCTGC GCGAGGCCTA TGGCGAGGAA AACCTCTCGG CCAAGGGCGC CTATGTCGTG 
GCCGGCGAGG GGCCGCGCGA CGTCACCCTG ATCGCCACCG GCTCGGAAGT GACCATCGCC 
ATGGCGGCGC GCGAGCTGCT GGCCGCCGAT GGCCTGGCCG CCGCCGTCGT CTCCATGCCG 
AGTTGGGAGC TGTTCGAGGC CCAGTCGGCC GAGTACCGCG AGGCGGTGCT GGGCCCGCGC 
GCCCGCCGGG TGGCGGTCGA AGCCGCCTCG GCCTTCGGCT GGGAGCGGTG GGTTGAAGAC 
AAGACCGCCG TGGTCGGCAT GCCGGGCTTC GGTGCCTCGG GTCCGATCGG CGATCTTTAT 
GAGCACTTCG GCATCACCGC CGAAGCCGTC GCCCGCGTCG CCAAGGCCCG GGCCGAGGGC 
TGA 

 

Protein sequence

MSAVPHADLA NAIRFLSADA VQKAKSGHPG MPMGMADVAT VLFTRFLTFD PAAPRWPDRD 
RFVLSAGHGS MLLYSLLYLT GYADIDLDQI KSFRQLGART AGHPEYGHVA GAETTTGPLG 
QGLANAVGMA LAERMTAARF GEAVVNHRTY VIAGDGCLME GISQEAISLA GHMKLERLIV 
LWDDNRICID GDVGLASSDD VPARFQASGW RTLACDGHDP QDITRALTEA QTSDRPTLIA 
CRTIIGKGAP TLQGTAKTHG SPLGDAEIAG ARAALGWPHA PFEVPEPILS AWRTAGARGG 
VARVAWEDRL ASLPGDERAT LIRALAGDLP AGWEDAVLAA KRALIETRPK VASRKASQMA 
LEVLVPQIPE LVGGSADLTG SNLTQVKGQA DILPGSYGGH YIHYGVREHG MGSLMNGLAL 
HGGVIPYGGT FLVFADYMRP AIRMAALMGL RAIYVLTHDS IGLGEDGPTH QPVEHLASLR 
AIPNLWTFRP ADAVETLECW ALAVGRSDGP SLLALSRQDL PTLREAYGEE NLSAKGAYVV 
AGEGPRDVTL IATGSEVTIA MAARELLAAD GLAAAVVSMP SWELFEAQSA EYREAVLGPR 
ARRVAVEAAS AFGWERWVED KTAVVGMPGF GASGPIGDLY EHFGITAEAV ARVAKARAEG