| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0591 |
|---|
| Symbol | |
|---|
| ID | 3834481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 701555 |
|---|
| End bp | 702481 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637824675 |
|---|
| Product | binding-protein dependent transport system inner membrane protein |
|---|
| Protein accession | YP_425682 |
|---|
| Protein GI | 83591930 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.101579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTACGTT TTATCCTCAA GCGGCTGATG ATCGCCGTAC CCACCTTGCT GGTCATCATC
ACCGTCGCCT TTTTCATGAT GCGCATCGCG CCAGGCGGTC CTTTCGATTC CGAACGCGCC
CTGCCGCCCG AAATCGAAAA GAACATCCTG GCCGCCTATA ATCTCGACAA GCCACTGATC
GACCAATACG CCCTTTACCT GGGCGGCATT CTTCACGGCG ATTTCGGTCC CTCGTTCAAG
ATCCGTGATT TTTCGGTCAG CGAGTTGATC CTGGCCGGGG CGCCGGCCTC GATCCAACTG
GGGCTGGCGG CGCTGATCCT GGCCTTAAGC GTCGGCGTGA CCCTGGGCAC CCTAGCCGCC
CTCCATCAGA ACGAGGCCGG CGATTTCGCG GTGATGGGGG TGGCGATGGT CGGCATCGTC
ATTCCCAATT TCGTCATGGC GCCGCTGTTG TCGCTGGTGC TTGGCGTCTA TTGGGGGATC
TTGCCGACCT CGGGCTGGGG CGATGGCGCC TTACGCTACA AGATCCTGCC GATCTTCGCC
CTCGCCCTGC CGCAGATCGC CTATATCGCC CGGTTGACCC GGGGATCGAT GGTCGAGGTG
CTACGCTCGA ACTTCGTGCG CACGGCGCGG GCCAAGGGCC TGGGCGAGCG GCTGGTGGTG
ATGCGTCACA CCCTGAAAGC CGGGCTGCTG CCCGTGGTGT CCTATCTGGG ACCGGCGGCG
GCGGCGGTGA CCACCGGCTC GGTGGTGGTG GAGACGATCT TCGCCGTCCC GGGCATCGGC
ACCTATTTCG TCAATGCCGC GCTCAACCGC GACTATCCGG TGGTGATGGG GGTGGTGATC
GTTTACGCCA GCCTGATCAT CTTGCTCAAT CTCGCCGTCG ATCTGCTGTA TGGCCTGATC
GACCCCAAGC TGCGGAGAGC GCGATGA
|
|---|
| Protein sequence | MLRFILKRLM IAVPTLLVII TVAFFMMRIA PGGPFDSERA LPPEIEKNIL AAYNLDKPLI
DQYALYLGGI LHGDFGPSFK IRDFSVSELI LAGAPASIQL GLAALILALS VGVTLGTLAA
LHQNEAGDFA VMGVAMVGIV IPNFVMAPLL SLVLGVYWGI LPTSGWGDGA LRYKILPIFA
LALPQIAYIA RLTRGSMVEV LRSNFVRTAR AKGLGERLVV MRHTLKAGLL PVVSYLGPAA
AAVTTGSVVV ETIFAVPGIG TYFVNAALNR DYPVVMGVVI VYASLIILLN LAVDLLYGLI
DPKLRRAR
|
|---|
| |