Gene Rru_A0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0588 
Symbol 
ID3834478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp698645 
End bp699661 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID637824672 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_425679 
Protein GI83591927 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.861389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGC CTTCGACAAG CACGTCCCCG ATCCTCTCGG TCCGCGACCT GCGCGTCACC 
TTCTCCCTGC CGCCGCGCCG GCTGTTTGGC GGACCGGTCG CCTTGAAGGC GGTCGATGGC 
GTCAGCTTCG ATGTGGCTGC GGGCGAGACC CTGGGCATCG TCGGCGAATC GGGCTGCGGC 
AAATCGACGC TGGGCCGCGC CCTCTTGCAA TTGATCCCGC CGACCAGCGG CGAGGTGGTG 
TGGCTGGGGC GCGATATCGC CGGTCTGCGC TCGCGCGCCA TGCGGCCCTT GCGCCGCGAT 
CTTCAGATCA TCTTCCAAGA TCCCTTGGCC AGCCTTGATC CGCGCATGAC CATCGGCGAC 
ATCATCGCCG AACCGCTGAT CACCCATCAC CCCGAGATGA CGGCCGAGAC CCTGCGCCAG 
CGGGTGCGGG CGATGATGGA CGAGGTCGGC CTGCTGCCGC AGATGCTCAA CCGCTATCCC 
CACGAGTTCT CCGGCGGGCA GTGCCAGCGC ATCGGCATCG CCCGGGCGAT GATCCTCGAA 
CCCAAGCTGA TCGTCTGTGA TGAACCGGTC TCGGCGCTCG ACGTGTCGAT CCAGGCGCAG 
ATCGTCAATC TGCTTCAGGA TCTGCAAAAG CGCTTCGGCC TGTCCTTGCT GTTCATCAGC 
CATGACCTAT CGGTGGTCCG CCATATCAGC CACCGCATCC TGGTGCTTTA CCTGGGGCGG 
GTGATGGAGA TCGCCGATCG TGACGGGCTG TATGACCGGC CCCGCCATCC CTATACCCGG 
GCGTTGATTT CGGCGGTGCC GATCGCCGAC CCGCGCAAGG AGCGCGAGAA GCCCCGGCTG 
ATCCTCGGCG GCGACCTGCC CAGTCCGATC GATCCGCCCT CGGGCTGCGT CTTTCGCACC 
CGCTGCCCCT TCGCCCGGGC GCGCTGCGCC AACGAGGTCC CCGTGCTGCG CCCCACCGGC 
CCCGGCCATC AGGCGGCCTG TCACTTCTTC GAGGATCTGA CCGCAACCGC CGCTTAG
 
Protein sequence
MSGPSTSTSP ILSVRDLRVT FSLPPRRLFG GPVALKAVDG VSFDVAAGET LGIVGESGCG 
KSTLGRALLQ LIPPTSGEVV WLGRDIAGLR SRAMRPLRRD LQIIFQDPLA SLDPRMTIGD 
IIAEPLITHH PEMTAETLRQ RVRAMMDEVG LLPQMLNRYP HEFSGGQCQR IGIARAMILE 
PKLIVCDEPV SALDVSIQAQ IVNLLQDLQK RFGLSLLFIS HDLSVVRHIS HRILVLYLGR 
VMEIADRDGL YDRPRHPYTR ALISAVPIAD PRKEREKPRL ILGGDLPSPI DPPSGCVFRT 
RCPFARARCA NEVPVLRPTG PGHQAACHFF EDLTATAA