Gene Rru_A0584 details

Gene Information

• Locus tag: Rru_A0584
• ID: 3834474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 693637
• End bp: 695478
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637824668
• Product: inner-membrane translocator
• Protein accession: YP_425675
• Protein GI: 83591923
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0559] Branched-chain amino acid ABC-type transport system, permease components; [COG4177] ABC-type branched-chain amino acid transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.625482
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCGGTCG ATTTCCTTAT CGTTCAGTTT CTGGGCGGGC TGGCCAGCGC CTCGTCGCTG 
TTCCTGGTCG CCGCCGGGCT GTCGATCATT TTTGGCGTGA CCCGGGTGGT GAATTTCGCC 
CATGGCACGC TGTTCATGAT CGGCGCCTAT CTGGCCTATA CCCTGGCCGA GACCCTGGGC 
CTTGGCTTCT GGCCGGCCCT GCTGCTGGCG CCGCTGGCCG TCGGCGGCCT GGGCGCCCTG 
ATCGAGATCG GCCTGCTGCG GCGGATCTAT CGCGCCCCCG AGCTTTTCCA ACTGGTCGCC 
ACCTTCGCCC TGGTGCTGAT CGCTAGCGAC GTGGTGCCGA TGATCTGGGG GCCGGAGGAC 
CTGTTGGGGC CGCGCGCCCC GGGCCTGGGC GGCGCCGTAA GCGTGATGGG CCGGGCGGTT 
CCCGAGTATG ATCTGTTCCT AATCGCCCTG GGACCCCTGG TTCTGGGCGC CCTGTGGCTG 
GTGTTCACCC GCACCCGCTG GGGCCTGCTG GTGCGCGCGG CGACCGAGGA CCGCGAGATG 
GTGGCGGCGC TCGGCACCGA TCAGCGCTGG CTGTTCACCG GGGTCTTCGC TCTTGGCGCG 
CTGCTGGCCG GCCTGGGCGG TGCCCTGGCC CTGCCGCGCG AGGCCATCGG CCATGGCATG 
GACGCCGGGG TGATCGTTCA GGCTTTCGTC GTTGTCGTCG TCGGCGGCAT GGGCAGCGTG 
CCCGGCGCCT ATCTGGCCGC CGTGCTGCTG GGGCTGGTCA ACGCCTTCGG TGTCGCCTTC 
TTTCCCCAGG GCACGCTGGT GACCATGGGG CTGGTGATGG GGGCGGTGCT GATCGTGCGT 
CCGCGCGGCC TTCTTGGCCG GATCGAAAGC GAGGGCGGCG TTTCCGCCGT GGGACCGGGG 
CCCCGGCTGC GTCCGGCGAG CGGCAAAGGC CGGCTGCTGT GGGGCCTGGG CGTGGTCCTG 
GTGCTCGCCG CGCCACGGTT TCTCGATGCC TATGGCCTGT CGCTGCTGTG CGAGGCGCTG 
ATCCTGGCGC TGTCGGCCAG CGCCTTGCAG CTGCTGATGG GGACCGGCGG CATGGTCAGC 
TTCGGCCATG GGGCGTTCTT TGGCCTGGGG GCTTACGGAA CGGCGGTGGC GGTGGTTCAG 
GGCGGGCTGT CTCTGCCCAT CGCCCTGGCC TGCGCGCCCT TGGCCGGGGG GCTGGGCGGG 
CTGCTGGTCG GTTGGCTGAT CAGCAGGCTG TCGGGGGTTT ATCTGGCGAT GCTGACCCTG 
GCCTTCGCCG AAATCATCCA TGCCCTGGCC ATTCAGGCGG TTGGGGTGAC CGGCGGCGAC 
AATGGCCTGA TCGGCGTCTG GCCGCCGCCC TGGGCCGGTG ATCCCGCCGT GTTTGCCTGG 
TTGGTGATGG CGATCTGCCT GCCCGCGCTG TTTGGTCTGC GCGCCCTGGC CCTTGGCGAA 
TTCGGCCGCC GCCTGCGGGC CCTGCGCGAT GCCCGCAGCC GGGCCGAGGC CAGCGGCATT 
GCCGCCGCCC GCCTGCACGC GCTCACCTTC GCCATCGTCG GCGCCGGCGC CGGGTTGGCC 
GGCGGGCTGT TCGCCTTCCT CAAGGGCAGC GTCTTTCCGG CGATCACCGC CATTCCAACC 
AGTGTCGACG CCCTGGTGAT GGTGCTGCTG GGTGGCCTGC ATGCCCTGGC CGGACCGCTG 
GTCGGCGCCT TCTTGTATTT GGGCCTGGAA TCGGTGGTCG CGGCGCGTAC CGATCTTTGG 
CAATTGGTGG TCGGGCTGGT GGTGCTCGGG CTGGTGCTGG TCTTCCCGCA AGGGGTGGCC 
GGCGCCGCCG GGCGATTGGC GCGCCGGGGA CGGCCCCAAT GA 

 

Protein sequence

MSVDFLIVQF LGGLASASSL FLVAAGLSII FGVTRVVNFA HGTLFMIGAY LAYTLAETLG 
LGFWPALLLA PLAVGGLGAL IEIGLLRRIY RAPELFQLVA TFALVLIASD VVPMIWGPED 
LLGPRAPGLG GAVSVMGRAV PEYDLFLIAL GPLVLGALWL VFTRTRWGLL VRAATEDREM 
VAALGTDQRW LFTGVFALGA LLAGLGGALA LPREAIGHGM DAGVIVQAFV VVVVGGMGSV 
PGAYLAAVLL GLVNAFGVAF FPQGTLVTMG LVMGAVLIVR PRGLLGRIES EGGVSAVGPG 
PRLRPASGKG RLLWGLGVVL VLAAPRFLDA YGLSLLCEAL ILALSASALQ LLMGTGGMVS 
FGHGAFFGLG AYGTAVAVVQ GGLSLPIALA CAPLAGGLGG LLVGWLISRL SGVYLAMLTL 
AFAEIIHALA IQAVGVTGGD NGLIGVWPPP WAGDPAVFAW LVMAICLPAL FGLRALALGE 
FGRRLRALRD ARSRAEASGI AAARLHALTF AIVGAGAGLA GGLFAFLKGS VFPAITAIPT 
SVDALVMVLL GGLHALAGPL VGAFLYLGLE SVVAARTDLW QLVVGLVVLG LVLVFPQGVA 
GAAGRLARRG RPQ