Gene Rru_A0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0563 
Symbol 
ID3834241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp665587 
End bp666852 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content68% 
IMG OID637824647 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_425654 
Protein GI83591902 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.540695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC AGCCAGCCGC GCGGACGGCT TTGAAAAAAC CGGCCTCCGG GGTGGGGCGA 
CGGGCCTTTC TCGCCGGATC GGCCGCCGGC ATTCTGGGGC TGGCCGCGCC GGCGATCCGC
CGGGCCCAGG CCGCCGAGGC GATTCGCATC GGCGAGATCA ACAGCTACAG CCAGATTCCG
GCCTTCACCC TGCCCTATCG CAACGGCTGG CAACTGGCGG TGGAGCAGAT CAACGCCGCC
GGCGGGTTGC TGGGCGGCCG GCCGCTGGAG GTCATCAGCC GCGACGACGG CGGCGATCCG
GGCAAGGCGG TGACCGCCGC CCAGGAGTTG CTGACCCGCC ACGGCGTCCA CGCCCTGGCC
GGCACCTTCC TGTCCCATGT CGGTCTGGCG GTGTCGGATT TCGCCCGCCA GCGCAAGGTG
TTGTTCATGG CCTCCGAGCC CTTGACCGAC GCCCTGACCT GGGAAAAGGG CAACCGCTAT
ACCTATCGCC TGCGGCCGAG CACCTATATG CAGGCGGCGA TGCTGGCGGC CGAAGCGGCG
AAGCTACCGA TCACCCGGTG GGCGACCATC GCCCCCAATT ACGAATATGG CCAGTCGGCG
GTGGCCCGCT TCAAGGAACT GCTGCTGGCC GCCCGCCCCG AGGTGACCTT CGTCGCCGAG
CAATGGCCCG CCCTTTACAA GCTTGACGCC GGCCCCACCG TTCAGGCCCT GCAGCAGGCC
GAACCCGAGG GCCTCTTCAA TGTGCTGTTT GGCGCCGATC TGCCGAAATT CGTGCGCGAG
GGACGGGTGC GCGGGTTGTT CGCCGGCCGT CAGGTGGTCA GCATGCTGAC CGGCGAGCCG
GAATATCTCA ACCCGCTCAA GGACGAGGCG CCCGAGGGCT GGATCGTCAC CGGTTATCCC
TGGTACGATA TCGACACCGC GCCGCACCGC GCCTTCGTCG AGGCCTATCG CGCCCGCTGG
AAGGAAGATC CCTTCGTCGG CTCGCTGGTG GGCTATAACA CCCTAACGGC GATGGCCGTC
GCCTTTGAAA AGGCCGGCGG CACCGAAAGT GAAACCCTGG TCGAGACCCT TAAGGACATG
GCGTTTTCCA CCCCGATGGG GCCGCTTTCC TTCCGCGCCA GCGATCACCA GTCGACCATG
GGCGCCTGGG TCGGCCGCAC GGCCCTGCGC GATGGCAAAG GGGTGATGGT CGATTGGCGC
TATGTGGATG GCGGCTCCGT TCTGCCGCCG CCCGAAGTGG TCAGCGCGTG GCGCCCCGCC
GGCTGA
 
Protein sequence
MNKQPAARTA LKKPASGVGR RAFLAGSAAG ILGLAAPAIR RAQAAEAIRI GEINSYSQIP 
AFTLPYRNGW QLAVEQINAA GGLLGGRPLE VISRDDGGDP GKAVTAAQEL LTRHGVHALA
GTFLSHVGLA VSDFARQRKV LFMASEPLTD ALTWEKGNRY TYRLRPSTYM QAAMLAAEAA
KLPITRWATI APNYEYGQSA VARFKELLLA ARPEVTFVAE QWPALYKLDA GPTVQALQQA
EPEGLFNVLF GADLPKFVRE GRVRGLFAGR QVVSMLTGEP EYLNPLKDEA PEGWIVTGYP
WYDIDTAPHR AFVEAYRARW KEDPFVGSLV GYNTLTAMAV AFEKAGGTES ETLVETLKDM
AFSTPMGPLS FRASDHQSTM GAWVGRTALR DGKGVMVDWR YVDGGSVLPP PEVVSAWRPA
G