Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0563 |
Symbol | |
ID | 3834241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 665587 |
End bp | 666852 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637824647 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_425654 |
Protein GI | 83591902 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.540695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGC AGCCAGCCGC GCGGACGGCT TTGAAAAAAC CGGCCTCCGG GGTGGGGCGA CGGGCCTTTC TCGCCGGATC GGCCGCCGGC ATTCTGGGGC TGGCCGCGCC GGCGATCCGC CGGGCCCAGG CCGCCGAGGC GATTCGCATC GGCGAGATCA ACAGCTACAG CCAGATTCCG GCCTTCACCC TGCCCTATCG CAACGGCTGG CAACTGGCGG TGGAGCAGAT CAACGCCGCC GGCGGGTTGC TGGGCGGCCG GCCGCTGGAG GTCATCAGCC GCGACGACGG CGGCGATCCG GGCAAGGCGG TGACCGCCGC CCAGGAGTTG CTGACCCGCC ACGGCGTCCA CGCCCTGGCC GGCACCTTCC TGTCCCATGT CGGTCTGGCG GTGTCGGATT TCGCCCGCCA GCGCAAGGTG TTGTTCATGG CCTCCGAGCC CTTGACCGAC GCCCTGACCT GGGAAAAGGG CAACCGCTAT ACCTATCGCC TGCGGCCGAG CACCTATATG CAGGCGGCGA TGCTGGCGGC CGAAGCGGCG AAGCTACCGA TCACCCGGTG GGCGACCATC GCCCCCAATT ACGAATATGG CCAGTCGGCG GTGGCCCGCT TCAAGGAACT GCTGCTGGCC GCCCGCCCCG AGGTGACCTT CGTCGCCGAG CAATGGCCCG CCCTTTACAA GCTTGACGCC GGCCCCACCG TTCAGGCCCT GCAGCAGGCC GAACCCGAGG GCCTCTTCAA TGTGCTGTTT GGCGCCGATC TGCCGAAATT CGTGCGCGAG GGACGGGTGC GCGGGTTGTT CGCCGGCCGT CAGGTGGTCA GCATGCTGAC CGGCGAGCCG GAATATCTCA ACCCGCTCAA GGACGAGGCG CCCGAGGGCT GGATCGTCAC CGGTTATCCC TGGTACGATA TCGACACCGC GCCGCACCGC GCCTTCGTCG AGGCCTATCG CGCCCGCTGG AAGGAAGATC CCTTCGTCGG CTCGCTGGTG GGCTATAACA CCCTAACGGC GATGGCCGTC GCCTTTGAAA AGGCCGGCGG CACCGAAAGT GAAACCCTGG TCGAGACCCT TAAGGACATG GCGTTTTCCA CCCCGATGGG GCCGCTTTCC TTCCGCGCCA GCGATCACCA GTCGACCATG GGCGCCTGGG TCGGCCGCAC GGCCCTGCGC GATGGCAAAG GGGTGATGGT CGATTGGCGC TATGTGGATG GCGGCTCCGT TCTGCCGCCG CCCGAAGTGG TCAGCGCGTG GCGCCCCGCC GGCTGA
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Protein sequence | MNKQPAARTA LKKPASGVGR RAFLAGSAAG ILGLAAPAIR RAQAAEAIRI GEINSYSQIP AFTLPYRNGW QLAVEQINAA GGLLGGRPLE VISRDDGGDP GKAVTAAQEL LTRHGVHALA GTFLSHVGLA VSDFARQRKV LFMASEPLTD ALTWEKGNRY TYRLRPSTYM QAAMLAAEAA KLPITRWATI APNYEYGQSA VARFKELLLA ARPEVTFVAE QWPALYKLDA GPTVQALQQA EPEGLFNVLF GADLPKFVRE GRVRGLFAGR QVVSMLTGEP EYLNPLKDEA PEGWIVTGYP WYDIDTAPHR AFVEAYRARW KEDPFVGSLV GYNTLTAMAV AFEKAGGTES ETLVETLKDM AFSTPMGPLS FRASDHQSTM GAWVGRTALR DGKGVMVDWR YVDGGSVLPP PEVVSAWRPA G
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