| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0551 |
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| Symbol | |
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| ID | 3833658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 651316 |
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| End bp | 652941 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637824635 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_425642 |
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| Protein GI | 83591890 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.475712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCCCCC TCGGGCGGCC ATGTCACCTT GCCGCCATGG ACAGCACCGA CGGACCCCTG
GATCTGATCG CCGAGCGCGC CGAAGCCGCC TGGAGCCGGG GGGACCGGCA CAGGGCGATG
ACTCTGGCCC GCCTGGGGCT TGGCCAGGAT GACGGCCATC CCCGCCTGCT GGCCGTTCTT
GGCGCCTTTG AGCAAGCCGA AGGCCGCTCG GCGGCGGCGG CCGGGCTGTT TCGCCGGGCG
ATGGCGCGCT GTGGCGATGA TCCGCTGATG CTCCATAACC TGGGGGTTGC CCTGCGCGGC
GCCGGGCTGA TCGATGCGGC GGCCGCCGCC TGGGAAGGGG TTCTGAGGGG CTGCCCCCAG
CGCTTCGCCA CCTTGTTCAA TCTGGCCCGC CTGCGCGACG ACCAGGGCCG GGGCGAGGAG
GCCTTGGCGC TGTATCGGCG GGCCTGTCTG GCCGATCCGG CGGCCAGCGA CGCCGCCTAT
AATCTGGGGA ACCTTCTGGC GCGGCGCGGC GCCCTCGCCC AGGCGGCCGA GGTTCTGGGC
AAGGCGGCGA GTGTCACTCC GCACGATGCC CGCATCCAGA CCAATCTGGG CATCGTGCTG
CGGCGCTTGG GCGATGCCGC CGGCGCTTTG GCCTGCCAGC GGCGGGCCGT GGCTCTTGAC
CCCGATCTGG CCGACGCCCA GTGGAACCTT GCCAATCTGC TGCTGGCCCT GGACGATTAT
GACGAAGGCT TCGCCCGCTA TGAATGGCGC AAGCGCCGCG CGCCGTGGCG GCTGGTCGAT
CCGCCTTTGG CCGAATGGCG GGGCGAGGAT CTGGCCGGTC GGCGGCTGTT GGTCGGCCTC
GAGCAAGGCG CCGGCGACAT GATCCAGGCG GCGCGCTTCC TGCCGGTTCT GGCCGGGCGC
GGGGCCAGGG TCATCGTTGA GGCGCCCGAC GCCCTGGCCG GTCTACTGGC GACCGTCGAT
GGCGTCGAGT CGGTGGTGGC GCCCGGGGCG TGGGCGGCGG CGCGGGCGAC GTGTCATATC
CGCGCCTTCA GCCTGCCCTA TCGGCTGGGC CTGCGCTTTG CCGATCTGGC GGCCACCGCC
GGGCCCTACT TGCGCGTTCC CCCTCGCACG CCGACGCCGC CAGCGCTGCC GCCGGGGGGC
CAAGGCCCGT GCGTCGGCCT GTGCTGGTCG GGCAATCCCG ATTTCACCGA AAACGCCGTA
CGCGCGGCGC CGCTGGCCGC CTTCGCCCCT TTGACCGCCG TCGAGGGGCT GACCTTCTTC
AGCCTGCAAA AGGGCCCGGC CGTGGCCGAG CTGGCGGCGA GCGGCCTGCC GGTCATCGAT
CTCGATCCGT GGCTGGTCGA TTACGCGGCG ACGGCGGCGG CGATGGCGCG GCTTGATATG
GTGGTGACCA CCGATACCAG CGTCGCCCAT CTGGCCGGGG CCTTGGGCCG GCCCTGCCTG
CTGCTACTGG CGGCCCATTG CGACTGGCGC TGGGGCATCG GCCGCGAGAC CAGCCCGTGG
TATCCTAGCC TGCGCTTGTT GCGCCAGGAA CGCCTCGGGG ACTGGCGGGC GCCGGTGGCG
CGTGCGGCGG CTCTGCTGGC CGGCTTGCGG CGCGGGACCG ATACTCGCGG GCCAGAATCG
ACATGA
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| Protein sequence | MPPLGRPCHL AAMDSTDGPL DLIAERAEAA WSRGDRHRAM TLARLGLGQD DGHPRLLAVL
GAFEQAEGRS AAAAGLFRRA MARCGDDPLM LHNLGVALRG AGLIDAAAAA WEGVLRGCPQ
RFATLFNLAR LRDDQGRGEE ALALYRRACL ADPAASDAAY NLGNLLARRG ALAQAAEVLG
KAASVTPHDA RIQTNLGIVL RRLGDAAGAL ACQRRAVALD PDLADAQWNL ANLLLALDDY
DEGFARYEWR KRRAPWRLVD PPLAEWRGED LAGRRLLVGL EQGAGDMIQA ARFLPVLAGR
GARVIVEAPD ALAGLLATVD GVESVVAPGA WAAARATCHI RAFSLPYRLG LRFADLAATA
GPYLRVPPRT PTPPALPPGG QGPCVGLCWS GNPDFTENAV RAAPLAAFAP LTAVEGLTFF
SLQKGPAVAE LAASGLPVID LDPWLVDYAA TAAAMARLDM VVTTDTSVAH LAGALGRPCL
LLLAAHCDWR WGIGRETSPW YPSLRLLRQE RLGDWRAPVA RAAALLAGLR RGTDTRGPES
T
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