| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0505 |
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| Symbol | |
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| ID | 3834203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 595288 |
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| End bp | 597432 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637824589 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_425596 |
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| Protein GI | 83591844 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.299874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC CGTCGACGCC CCTGGTTTGG CCGGGTCAGC CCTTTCCCCT GGGTGCGACC
TGGGATGGAT CGGGGACCAA CTTCGCCTTG TTCTCGGCCC ATGCCGAAAA GGTCGAGCTC
TGTCTGTTCG ACCGGGCGGG CCGCAAGGAA ACCGCCCGCA TCGTTCTGCC CGAATATACC
GACGAGATTT GGCACGGTTA TCTGCCCGAC ATCCGCCCCG GCCAGATGTA CGGCTATCGG
GTTTATGGAC CCTATGATCC CAATGCCGGC CACCGCTTCA ACGCCAATAA GCTGCTGATC
GACCCCTACG CCAAATCGCT CAAGGGCGAG ATCCTGTGGC ATGACGCGCT GTTCGCCTAC
AAGCTCGGCC ATCCCGATGG CGATCTGACC TTCGATCGCC GCGACTCGGC CCGCCATATG
CCCAAATGCG AGGTGGTCGA TCCGGCCTTT ACCTGGGGGC GGTCGATGGA GCCGCATCCC
TGGCATGAGA CGGTGATCTA CGAAATGCAT CCGCGCGGCT TCACCATGCT CCACCCGGGG
GTGCCCGAAG AGCTGCGCGG CACCTTCGAC GGCCTCGCCC ACCGTCGCGT CACCGATTAC
CTGACCGATC TGGGGGTGAC CGCCATCGAA CTATTGCCCG TCCATGCCTA TGTGCAAGAT
CGCCACCTGA TCGATCGCGG GCTGACCAAT TACTGGGGCT ATAATTCGAT CGGTTTCCTC
GCCCCCCATG CCACCTATCT TGGCCATGGC CGCACCGCCT CCGCCTTCAA GGCCTTCGTC
CAGAAGATGC ACGACGCCGG GCTCGAGGTG ATCCTTGATG TGGTCTACAA CCACACCGCC
GAGGGCAATC ATCTGGGGCC GACCCTGTCG TTCAAGGGCA TCGACAACCG CTCGTATTAT
TATCTGATGG GCGAAGACCT CCGCCATTAC AACAACTTCA CCGGCACCGG CAACGCCTTG
GAACTGCGCC ACCCGCGCGT TCTGGGCATG GTGATGGACT CGCTGCGCTA TTGGGCGACG
GCGATGGGGG TCGATGGTTT TCGCTTCGAT CTGGCGACCA CCCTGGCCCG GGTCGAAGGG
CCCTTCACCG AACACGCCGG TTTTCTGGAC GCCGTGGCCC AGGACCCCGT GCTCAGCCAC
GTCAAGCTGA TCGCCGAGCC CTGGGATACG GGCCTGGGCG GCTATCAGGT CGGCGCCTTT
CCGCCGGGGT GGGCGGAATG GAACGACCAG TATCGCAATA CCATTCGCAA GTTTTGGAAG
GGCGATGACG GCCTGTTGCC GACGATGGCC GGGCGGTTTT CGGCCTCCTC GGATGTCTTC
AACCGCCGGG GCCGTCGGCC TTGGGCCAGC GTCAATTTCA TCACCGCCCA CGACGGCTTC
ACCCTGGCCG ATCTGGTTTC CTACAACGGC AAGCACAACG AGGCCAACGG CGAGGACAAT
CGCGACGGCT CGGACGACAA CAACTCGTGG AACTGCGGCG CCGAGGGGCC GACCGACGAC
GAGGAGATCA ATACCCTGCG CCGCCGCCAG ATGCGCAACA TGCTGGCCAC CCTTTTGCTC
TCCCAGGGCA CGCCGATGCT GCTGGCCGGC GACGAATTCG CCAATAGCCA GAATGGCAAC
AACAACGCCT ATTGCCAGGA CAACGCCCTA AGCTGGCTGG ACTGGGACGG CATCGACGAA
AAGGCGCGCT CGCAGATCGC CTTCGTGACC AGCCTGCTGC GCCTGCGCCG CGAACATGTG
GTCTTCCACC GCACCCGCTT CTTTACCGGC TCGGTGATTC CGGGAACCGA GGTCAAGGAT
GTCGTCTGGT TGCGCCCGGA CGGCGAGGAG ATGACCGAGG CCGATTGGGG CAATTCGGTC
AGTCAGGCCC TGGCCATCCG TCTTTCGGGC GAAGCCGGCC TGACCCACCT GGATCGCCGG
GGCCGTCAGC AAACCGACGA TACCTTCCTG CTGGTGCTCA ACGCCAGCCA CACCGAGGTC
GTCTTCACCC TGCCCGAAGG CGGACGTTGG GAAACCGTTA TCGACACCAT GGACGAGGAT
GGCCAGTCGA GTCTGCCCAA AGCGGATGGC GGGACCATCC GCGCCCTGCC CGGGCGCAGC
CTTCAGGTGC TGCGCTGCCG CGCCGCCCAT GGGAGATCGG CATGA
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| Protein sequence | MSAPSTPLVW PGQPFPLGAT WDGSGTNFAL FSAHAEKVEL CLFDRAGRKE TARIVLPEYT
DEIWHGYLPD IRPGQMYGYR VYGPYDPNAG HRFNANKLLI DPYAKSLKGE ILWHDALFAY
KLGHPDGDLT FDRRDSARHM PKCEVVDPAF TWGRSMEPHP WHETVIYEMH PRGFTMLHPG
VPEELRGTFD GLAHRRVTDY LTDLGVTAIE LLPVHAYVQD RHLIDRGLTN YWGYNSIGFL
APHATYLGHG RTASAFKAFV QKMHDAGLEV ILDVVYNHTA EGNHLGPTLS FKGIDNRSYY
YLMGEDLRHY NNFTGTGNAL ELRHPRVLGM VMDSLRYWAT AMGVDGFRFD LATTLARVEG
PFTEHAGFLD AVAQDPVLSH VKLIAEPWDT GLGGYQVGAF PPGWAEWNDQ YRNTIRKFWK
GDDGLLPTMA GRFSASSDVF NRRGRRPWAS VNFITAHDGF TLADLVSYNG KHNEANGEDN
RDGSDDNNSW NCGAEGPTDD EEINTLRRRQ MRNMLATLLL SQGTPMLLAG DEFANSQNGN
NNAYCQDNAL SWLDWDGIDE KARSQIAFVT SLLRLRREHV VFHRTRFFTG SVIPGTEVKD
VVWLRPDGEE MTEADWGNSV SQALAIRLSG EAGLTHLDRR GRQQTDDTFL LVLNASHTEV
VFTLPEGGRW ETVIDTMDED GQSSLPKADG GTIRALPGRS LQVLRCRAAH GRSA
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