Gene Rru_A0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0488 
Symbol 
ID3834017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp573218 
End bp575266 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content66% 
IMG OID637824573 
ProductTonB-dependent receptor 
Protein accessionYP_425580 
Protein GI83591828 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4206] Outer membrane cobalamin receptor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATCG GCTGCGCGGC GTTCCCGGAT CGGGAAGCCG CGTTGGGGGG ACGTGTCATG 
GGTTATGGAT CGCCTGATCG CGCGTGGCGC GCGGGGATGG GAGTGTTTGG GGTGGCCGTC
GCCGCCGTGA TGGCGGGGGT GGTCGGCGCC AGCGGGGCCG CCGCTTGGGC CGACGAGCCG
GAAACCACCG AAGGGCTGAT CGTTTCGGCC AGCCGGACCC CGGTGGCGGC GAAGGATCTC
GGGCGCTCGG TCAGCGTCCT TACCGGCGAG GACTTGCGCG AACGCGGCGT GCGCTATGTG
TCCGACGCCC TGCGCCAATT GCCCGGCGTC GCCGTCAGTC GGGCCGGCGG GCCCGGCGGC
GTGACCCAGG TGCGCCTTCG CGGCGCCGAG GCCAACCATG TTCTGGTGCT GATCGATGGC
GTGGCCGTAT CGTCGCCGGC TTCGGGCGAA TACGATTTCG CCGGTCTGGT GGCCAGCGAT
ATCGAGCGCA TCGAGGTGCT GCGCGGGCCG CAATCAGCAC TTTGGGGCTC CAACGCCACC
GCCGGCGTCA TCAGCATCGT TACCCGGCGC GGCACGCGCA ACCAGAGCGG CGGCGAGGTG
AGCCTGGACG GCGGCAGCGA TGGCACCTTC GGCGGATCGG TCGCCATGGG GGCGGGCACC
GAGGATCTCG ACGCCGCCCT GTCGCTGGCG GGCTTGCGGG CCGGCGGGCT GGATGTCTCG
GCCGATCCCG GCGGCGATAT CGACCGCGAC CGCAACATCA CCCTGAACGG CAAGATCAAT
TACGACGCCA GCGACTGGCT GCGCTTTGGC GCCACGGCGC GGATGGCCGA CCGCCGCTCC
GATTACGACG GCTTCGCCTT TGGCGCCCCC AAGCGCTCCG ATCTGGTCTA TGACGGGGAT
TATGCCACCG ATCAGCGCGA TGTCGCGGTA TCGGGCCATG TCGATGTCGA TAGCCTGGGC
GGCAGGCTGA GCCATCAGGC GCGTTTTGAC TATACGCGGG TCGATATCCA GACCCTGCTT
GATGGGCTGT CCACCGCCAA ATCCCTGGGG CAGCGCTTCA AGGGGACTTA TCAGACGACG
CTGGCGCTTG ATGCGCCGAC GCTAACCAGC GCCAATCACC GGCTGACGGC GGCGGTGGAT
TGGCAGCGCG AGACTTTCCG CAACACCGAT GCCGATCTGG TTTCCGATCC CTCGCAGGTG
GAAGGCCAGC AGCGCGATCT TTACGGGCTG GTCGCCGAAT ATCGCGGCAC GCTGTTTCAA
GATCTTGATC TGCAGGCAGC CCTCCGTCAC GACATCAACG ACAGCTTCGC CGATTCGACG
ACCTTTAGCA CCAGCGCGTC CTATGAGGTG CGGCCAACCC AGTCGCGTCT GCACGCCTCG
GTTGGCACCG GCGTGACCAA TCCGACCTTT TATGAGCAAT TCGGCTTCAT CCCCAGCCAG
TTCATCGGCA ACGCCAACCT CGATCCCGAG AAGAACTTCG GCTGGGACGC CGGCATCGAG
CAGCGCATCC TCGGCGATCA ATTGACCCTG GACGCCACTT ATTTCCATGA AACCCTGACC
GATGAGATCG TCACCGTCTA TAAGGCGCCC AGCTACCTGG GGACGGCGGT CAACGAGAAT
GGCGACAGCC GCCGCCAGGG GATCGAACTG ACGCTAACGG CGCGGCCGAC CGAGGCTTTG
ACCCTGACGG GCAATTACAC CTGGACCGAC GCCTATGATC CCGACGACAA GATCGAGGTC
CGCCGTCCGC GCCACCGCGC CACTCTGGCC GCCGACTACC GCTTCCTTGA CAACCGCGCC
GGCGTGAACG CCGAGGTGGT CTATGCGGCG GGCAATTACG ATTTCGATTA CCGGGCGGCG
AGCATGGGGA GCGCCCGGCT GCGGCTTGAT GATTATGCCC TGCTCAATCT GGGGGGACGC
TACAAGGTGA CCGAGGCCGT CGAGGTCTAT GGCCGGATCG AGAACGCCCT TGATACCCAA
TATGCCGATC TGGACGGCTA CGCCACCCAG GGCGTGACCG GCTATTTCGG CCTGCGGGCC
CGGTTCTAG
 
Protein sequence
MVIGCAAFPD REAALGGRVM GYGSPDRAWR AGMGVFGVAV AAVMAGVVGA SGAAAWADEP 
ETTEGLIVSA SRTPVAAKDL GRSVSVLTGE DLRERGVRYV SDALRQLPGV AVSRAGGPGG
VTQVRLRGAE ANHVLVLIDG VAVSSPASGE YDFAGLVASD IERIEVLRGP QSALWGSNAT
AGVISIVTRR GTRNQSGGEV SLDGGSDGTF GGSVAMGAGT EDLDAALSLA GLRAGGLDVS
ADPGGDIDRD RNITLNGKIN YDASDWLRFG ATARMADRRS DYDGFAFGAP KRSDLVYDGD
YATDQRDVAV SGHVDVDSLG GRLSHQARFD YTRVDIQTLL DGLSTAKSLG QRFKGTYQTT
LALDAPTLTS ANHRLTAAVD WQRETFRNTD ADLVSDPSQV EGQQRDLYGL VAEYRGTLFQ
DLDLQAALRH DINDSFADST TFSTSASYEV RPTQSRLHAS VGTGVTNPTF YEQFGFIPSQ
FIGNANLDPE KNFGWDAGIE QRILGDQLTL DATYFHETLT DEIVTVYKAP SYLGTAVNEN
GDSRRQGIEL TLTARPTEAL TLTGNYTWTD AYDPDDKIEV RRPRHRATLA ADYRFLDNRA
GVNAEVVYAA GNYDFDYRAA SMGSARLRLD DYALLNLGGR YKVTEAVEVY GRIENALDTQ
YADLDGYATQ GVTGYFGLRA RF