Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0488 |
Symbol | |
ID | 3834017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 573218 |
End bp | 575266 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637824573 |
Product | TonB-dependent receptor |
Protein accession | YP_425580 |
Protein GI | 83591828 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCATCG GCTGCGCGGC GTTCCCGGAT CGGGAAGCCG CGTTGGGGGG ACGTGTCATG GGTTATGGAT CGCCTGATCG CGCGTGGCGC GCGGGGATGG GAGTGTTTGG GGTGGCCGTC GCCGCCGTGA TGGCGGGGGT GGTCGGCGCC AGCGGGGCCG CCGCTTGGGC CGACGAGCCG GAAACCACCG AAGGGCTGAT CGTTTCGGCC AGCCGGACCC CGGTGGCGGC GAAGGATCTC GGGCGCTCGG TCAGCGTCCT TACCGGCGAG GACTTGCGCG AACGCGGCGT GCGCTATGTG TCCGACGCCC TGCGCCAATT GCCCGGCGTC GCCGTCAGTC GGGCCGGCGG GCCCGGCGGC GTGACCCAGG TGCGCCTTCG CGGCGCCGAG GCCAACCATG TTCTGGTGCT GATCGATGGC GTGGCCGTAT CGTCGCCGGC TTCGGGCGAA TACGATTTCG CCGGTCTGGT GGCCAGCGAT ATCGAGCGCA TCGAGGTGCT GCGCGGGCCG CAATCAGCAC TTTGGGGCTC CAACGCCACC GCCGGCGTCA TCAGCATCGT TACCCGGCGC GGCACGCGCA ACCAGAGCGG CGGCGAGGTG AGCCTGGACG GCGGCAGCGA TGGCACCTTC GGCGGATCGG TCGCCATGGG GGCGGGCACC GAGGATCTCG ACGCCGCCCT GTCGCTGGCG GGCTTGCGGG CCGGCGGGCT GGATGTCTCG GCCGATCCCG GCGGCGATAT CGACCGCGAC CGCAACATCA CCCTGAACGG CAAGATCAAT TACGACGCCA GCGACTGGCT GCGCTTTGGC GCCACGGCGC GGATGGCCGA CCGCCGCTCC GATTACGACG GCTTCGCCTT TGGCGCCCCC AAGCGCTCCG ATCTGGTCTA TGACGGGGAT TATGCCACCG ATCAGCGCGA TGTCGCGGTA TCGGGCCATG TCGATGTCGA TAGCCTGGGC GGCAGGCTGA GCCATCAGGC GCGTTTTGAC TATACGCGGG TCGATATCCA GACCCTGCTT GATGGGCTGT CCACCGCCAA ATCCCTGGGG CAGCGCTTCA AGGGGACTTA TCAGACGACG CTGGCGCTTG ATGCGCCGAC GCTAACCAGC GCCAATCACC GGCTGACGGC GGCGGTGGAT TGGCAGCGCG AGACTTTCCG CAACACCGAT GCCGATCTGG TTTCCGATCC CTCGCAGGTG GAAGGCCAGC AGCGCGATCT TTACGGGCTG GTCGCCGAAT ATCGCGGCAC GCTGTTTCAA GATCTTGATC TGCAGGCAGC CCTCCGTCAC GACATCAACG ACAGCTTCGC CGATTCGACG ACCTTTAGCA CCAGCGCGTC CTATGAGGTG CGGCCAACCC AGTCGCGTCT GCACGCCTCG GTTGGCACCG GCGTGACCAA TCCGACCTTT TATGAGCAAT TCGGCTTCAT CCCCAGCCAG TTCATCGGCA ACGCCAACCT CGATCCCGAG AAGAACTTCG GCTGGGACGC CGGCATCGAG CAGCGCATCC TCGGCGATCA ATTGACCCTG GACGCCACTT ATTTCCATGA AACCCTGACC GATGAGATCG TCACCGTCTA TAAGGCGCCC AGCTACCTGG GGACGGCGGT CAACGAGAAT GGCGACAGCC GCCGCCAGGG GATCGAACTG ACGCTAACGG CGCGGCCGAC CGAGGCTTTG ACCCTGACGG GCAATTACAC CTGGACCGAC GCCTATGATC CCGACGACAA GATCGAGGTC CGCCGTCCGC GCCACCGCGC CACTCTGGCC GCCGACTACC GCTTCCTTGA CAACCGCGCC GGCGTGAACG CCGAGGTGGT CTATGCGGCG GGCAATTACG ATTTCGATTA CCGGGCGGCG AGCATGGGGA GCGCCCGGCT GCGGCTTGAT GATTATGCCC TGCTCAATCT GGGGGGACGC TACAAGGTGA CCGAGGCCGT CGAGGTCTAT GGCCGGATCG AGAACGCCCT TGATACCCAA TATGCCGATC TGGACGGCTA CGCCACCCAG GGCGTGACCG GCTATTTCGG CCTGCGGGCC CGGTTCTAG
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Protein sequence | MVIGCAAFPD REAALGGRVM GYGSPDRAWR AGMGVFGVAV AAVMAGVVGA SGAAAWADEP ETTEGLIVSA SRTPVAAKDL GRSVSVLTGE DLRERGVRYV SDALRQLPGV AVSRAGGPGG VTQVRLRGAE ANHVLVLIDG VAVSSPASGE YDFAGLVASD IERIEVLRGP QSALWGSNAT AGVISIVTRR GTRNQSGGEV SLDGGSDGTF GGSVAMGAGT EDLDAALSLA GLRAGGLDVS ADPGGDIDRD RNITLNGKIN YDASDWLRFG ATARMADRRS DYDGFAFGAP KRSDLVYDGD YATDQRDVAV SGHVDVDSLG GRLSHQARFD YTRVDIQTLL DGLSTAKSLG QRFKGTYQTT LALDAPTLTS ANHRLTAAVD WQRETFRNTD ADLVSDPSQV EGQQRDLYGL VAEYRGTLFQ DLDLQAALRH DINDSFADST TFSTSASYEV RPTQSRLHAS VGTGVTNPTF YEQFGFIPSQ FIGNANLDPE KNFGWDAGIE QRILGDQLTL DATYFHETLT DEIVTVYKAP SYLGTAVNEN GDSRRQGIEL TLTARPTEAL TLTGNYTWTD AYDPDDKIEV RRPRHRATLA ADYRFLDNRA GVNAEVVYAA GNYDFDYRAA SMGSARLRLD DYALLNLGGR YKVTEAVEVY GRIENALDTQ YADLDGYATQ GVTGYFGLRA RF
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