| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0478 |
|---|
| Symbol | |
|---|
| ID | 3834007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 560754 |
|---|
| End bp | 562100 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637824563 |
|---|
| Product | radical SAM family protein |
|---|
| Protein accession | YP_425570 |
|---|
| Protein GI | 83591818 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATG CCCGAGAGTG GAAACCCTCC GCCTTCAACC TTCTTTTGGA AGGCAAGGAT
GGACAGATTC TGTTCAACAG CGTCACCGGC CATGCGCTGT GGCTTGACGA GGGCCGCCGG
GCGGCGATCG ATCAATGCCT GACCGGCCTG GGGGGCGACG CAACCGCCTT GCCCGATCTG
GCCGAGGCCC TGGCCAAGCT CGGCTTCGCC GTGCCGGCCC AGGCCGATGA ATACGCCCTG
GAAAAGGCCC GCTACCTTGC CCATCGCGAT GATCCGCGCC GGCTTTATCT GACCCTGGCG
CCGACAATGC AGTGCAACAT GAAATGCAGC TACTGCTTCC AGCAGAACGT CGAGCACTCA
CGGGCCATGA CCCCGGCGAT CGCCAAGGGC GTGGTGGAGT TCGCCCGGCG CAAGGCCGAA
ACCGCCCAAG GCATGGTCGT GCAATGGTTC GGCGGCGAAC CGCTGATGGC CTGGACCACC
ATCCAGACGA TGAGCGCCCA ACTGCAGGCC ATCTGCGCGG CCAGAGGCAT CGGCTATTAC
GCCGAGATGC TGACCAATGG CTTGCTGATG ACGCCCGAGA TCGTCGCCGC CCTGCCCAAA
ATGGCCGTGC GCGCCTTACA GATCTCGCTT GATGGCGCGG TGACGACCTA TGCCGAGCGC
CGCCGCGTGC CCCTGGACCG GGCCGAGGCC TATTACCGCT TCCTGATGGC GCATATGCCC
GCCCTGATCG AAGGAACGGG CAGCGTCACC ATCCGCATCA ATGTCGACCG CCAGAACATC
ACCGAGGCCA AAGACGTAGT CAGGATGTTC AAGCGCCACG CCATCCTGGA TCCCCGCCTG
GATTTCCGCC TGGGCTTCAT CAATACCAGC CGCGGCATCA TCGACTGCAT TCCCCACGAC
TGCTTCTCCA ACTCGGAATT CGCCGATGAG GAAGACGACT TCCGCCGCTT CCTCAAAGAC
CAGGGCTATA TGGTCTATGG CATGCCCCAG CCGGTGAACC ATCCCTGCAC CGCCACCTTG
AGCAACGGCT TCACCATCGA TCCCCAGGGC CGTATCGGCA AATGCGTGCC GGCGGTGGGC
ACCGACCAGT CGGTTTTCGC CCGCATCCAC CCCGACGACA TCGACCGCAC CCTGGCCGAG
GTCGAGAGCG CGACCATCCC CTATGGCGAT TTCGACCCCT TCACCAGCGC CGGCTGCGCC
GGTTGCACCC TGCTGCCGGT CTGCCTGGGT TCCTGCCCGA AACTGCACGA GGCCGGTCAG
TTGCTGTCGT GCAGCATGAA GGAGGGCCTG GAAGACAAAA TGGCCTTCTA CGGCGCCTTC
CACCACGAAC GCGCCACGGC GCCGTGA
|
|---|
| Protein sequence | MFDAREWKPS AFNLLLEGKD GQILFNSVTG HALWLDEGRR AAIDQCLTGL GGDATALPDL
AEALAKLGFA VPAQADEYAL EKARYLAHRD DPRRLYLTLA PTMQCNMKCS YCFQQNVEHS
RAMTPAIAKG VVEFARRKAE TAQGMVVQWF GGEPLMAWTT IQTMSAQLQA ICAARGIGYY
AEMLTNGLLM TPEIVAALPK MAVRALQISL DGAVTTYAER RRVPLDRAEA YYRFLMAHMP
ALIEGTGSVT IRINVDRQNI TEAKDVVRMF KRHAILDPRL DFRLGFINTS RGIIDCIPHD
CFSNSEFADE EDDFRRFLKD QGYMVYGMPQ PVNHPCTATL SNGFTIDPQG RIGKCVPAVG
TDQSVFARIH PDDIDRTLAE VESATIPYGD FDPFTSAGCA GCTLLPVCLG SCPKLHEAGQ
LLSCSMKEGL EDKMAFYGAF HHERATAP
|
|---|
| |