| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0439 |
|---|
| Symbol | |
|---|
| ID | 3834005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 516351 |
|---|
| End bp | 517445 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637824523 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_425531 |
|---|
| Protein GI | 83591779 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGATT CGGTTCTGAC CTCTCGCGCT CTGTGTCGTG GCCTCGCGGT GGTTCTGGCC
ATCGGTTTCG CTCTGCTGTC GCCGCTGGCC GGTCGCGCCG AGCAAGCACC GGCGTCCCCG
ATCTCCGCAG CGGAGGGGGA CACCCTTAGG CAGGTGCGCG AACGGGGGTA TCTGACCTGC
GGCGTCAATG CCCGGCTGAC CGGCTTGGGA TCCGTCGACC CCGACGGGGT GTGGCGCGGC
TTTGACATCG ATTATTGCCG GGCGGTGGCG GCGGCCGCCC TTGGCGACAG CGGACGGGTC
CGATTCGTTC CCCTGGATAT CCGTTCGCGC CTGCTGGCCC TGACCAGCGG CGAGGTCGAT
CTGCTGTCGC GCAACACCAC CTGGACGTTG GAGCGCGATG CCGGCCAAGG CATCTCGTTC
GTTGGCGTCA GTTTATTCGA TGGACCGGGG CTGCTCGCCT GGAAGGATCT TCCCGGCGAC
GATCTGGCCT CGCTGCCGCC GACGGCCCGT CTCTGCGTCC AAAGCGCGGC GACGGCGGCC
CGGGTGCTTC CCGCCCGCAT GGCCGCCGCC GGTTTGTCTT TTACCATTCT GCCCTTTCGC
TCGCTGGAAG AGGCGCGCAT GGCCTTGTTC ACCCGGGCCT GCGACGGTTA TGTCGCCGAT
CGCACGGCGC TGGCCTCGCT GGCGACCTTC GAGGCGCCGC GCCCCGACGC CCTGCGCCTG
TTGCCCGATC TGTTGGCCGT TGAGCCGCTG GGGCCGGCGG TGCGCGACGG CGATGCCAAT
TGGTTCGACA TCGCCCGCTG GACCCTGTTC GCCCTGATCA AGGCCGAGGA AGAGGGGTTA
AGCCACGATC GCCTGCCCGC GGTGCTTGAA AGCACCCAGG ATCCGGAGCT GCGCCGCTTT
CTGGGGCTTG ATCCCGGAGT GGGGGCGCCC CTTGGTCTGG ACGACGCCTG GGTCCGCCGG
ATTGTCAGTC AGGTCGGCAC CTACGGCGAG GTCTTCGACC GCAATCTGGG CCAGGGCAGC
CCTCTGAAGC TTGAGCGCGG GCCCAATGCC CTGCGGCGCG ACGGCGGGTT GATGGTCGCC
CCGCCGTTTT TCTAA
|
|---|
| Protein sequence | MEDSVLTSRA LCRGLAVVLA IGFALLSPLA GRAEQAPASP ISAAEGDTLR QVRERGYLTC
GVNARLTGLG SVDPDGVWRG FDIDYCRAVA AAALGDSGRV RFVPLDIRSR LLALTSGEVD
LLSRNTTWTL ERDAGQGISF VGVSLFDGPG LLAWKDLPGD DLASLPPTAR LCVQSAATAA
RVLPARMAAA GLSFTILPFR SLEEARMALF TRACDGYVAD RTALASLATF EAPRPDALRL
LPDLLAVEPL GPAVRDGDAN WFDIARWTLF ALIKAEEEGL SHDRLPAVLE STQDPELRRF
LGLDPGVGAP LGLDDAWVRR IVSQVGTYGE VFDRNLGQGS PLKLERGPNA LRRDGGLMVA
PPFF
|
|---|
| |