| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0438 |
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| Symbol | |
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| ID | 3834004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 513394 |
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| End bp | 516138 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824522 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_425530 |
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| Protein GI | 83591778 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.41519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTTGGC GCCTTAGCGT GCGCATGCGT CTCCTGGCGG TTTTTGGCGT GGCGGCCCTG
TTCGCCGTCA TCGCCAGCGC CATGGGATTG CTGGCCTTCG GCTCGGTGGA ACGGGCCCAG
AAATCGTTTC TTGAAAGCCG TCTGCCGACC GTTGAGCTGG CCCAGTCCCT GGCCCATCGC
GCCCAGGCCG TGGCCGCCGC CGCGCCGCAA ATGGTGATCG CCTCGACCCA GGCCGGAAGG
GACTCGGCCG GGGCGCAGAT CTCGACCCAG ATCGCCAACC TCGATAGGCT GCTCGTCGCC
TTGCGCCCGC GCGTTTCCGA CCGGTCCTTT CTTGAGCAAC TCGAGGCCCA GAAGGCCGAT
CTGACCGAAG CCCTCAAGGC CCTTGATCAT TGGGTCGGCC GGCGCATCGG CCTTCGCCGC
AAACTGGACG AGCGCCTGAG CGAAGCCCGC GACCGCCTGA ACGAGGCCCG CGCTCTTTTG
GCCCATCGCC TTGCCAAGAG TTCCCCGGCC GACGACCAGC CCGTGCGGTT GGCGATGGCG
CTGGTTTCCA TCGAACGCGC CGCCACCCTC CTCGAGGCCC TTCCCCTGGC CGCCGCCGGG
CGATTGGCTT GGCTGGAAAG CGCCTTTGGC GCCGAGTTGA CCATGGCCGC CAGAGACAGT
GAGGGCGATG GTTCCTGGGA GGGGGCGGGC GAGGTGCGAG GCGCGCTCGC CGCCGCCGAG
GCCCTGGCTC GGGGCCCCGA GGGCCTGTTC GCCACCCGCG ACGGGCTGGA GGAGGCCGAG
CGGCGATGCG AGGCGCTGCT TGTGGCCTAT TCCCAATTCG CCAATCGTCT CGTCTATTCC
GCCGATACCC TGGCGGCGGA AACCGCCGCC GTCATGAATG CCGACGGGCG GTCGCTGACC
GCCACCCTTG GCCTCATCAG CCTGATCCTC TTGGCCATCG CCGCCCTCGC CGTCGGCGGC
GCGCTGGTTA TGGCGCTGTT TGCCGACCGG ACGATCTCGG GACGGCTGGC GACCTTGCGC
CAAAGCATGG CCGCCCATGT GGCGGGACTG GACGCCCCCC TGCCCGACCT TGGTCGCGAC
GAGATCGGCG AGATGGCGCA GGCGTTGAAA ATCTTCGTCG CCACCATCGC CGATCGGGAA
GGCGCCCTGA AGGCCAGCCA GGACTATCTG CGCGCCGTTC TTGACGCCGT GCCCGAGGGA
ATCCTGACCA TCACGGATAC GGGCGAAGTG GTCGGCGCCA GCCGCTCGGC CGAGTCGCTA
TTCGGCCCGG GCCCCGGCCT CATTGGCAAG GAGTTGAGCC TTCTGATCAG CGACGCCGAG
GGCGGCCGCC TGTCGCTTGA GGGCGCGGAA AGCGCCGGCG CCCCCCAGGC GGTGATCGCC
CACCGCGCCG ATGGCGACAG TTTTCCCGGG GAAATCACCG TGGCGGGGAT TCTCCGCGAC
GATCGCCAGA TCCATGTGCT CAGCCTTCGC GACATTTCCG AACGTCAGCG AATCGAGGCC
GAACGCCAAC GCTTCGTCGC CCTGCTCGCC GCCGCCCAGG AGGCCACGGC CGATGGCTTG
ATGGTCATCG ATCTGGACGG CGCGATCATC ACCTGCAATC AGAAATACTA TGATACCGTC
GGCATCAGTC CCGACGCGTT CGTCCCGCGG TCGCGCGATG AAAGGCTGGC CCTGCTTGCC
GGGCTGATGG CCGAGCCCCA GTATTTCATC GACCGTATCG AGGAAATGGA GGCCGACCCC
GATCTGACGG CCTATGACAT ACTCCATCTG GCCGATGGCC GGCTGATCGA GCGCTATTCG
TCACCCTTCA AGGTCGGCGG AATCCTCGCC GGCCGACTGT GGAGCGTGCG CGACATCACC
GAGCGCGAAA AGGCGCGCGC CGAGTTGACC GAAGCCAAGG AAGCGGCCGA ACGGGCCCTG
AGCGACCTCA AGGACGCCCA GCGCAATCTG GTCGAGGCCG AGAAGATGGC GGCCCTTGGC
CAGTTGGTGG CGGGCATCGC CCATGAGATC AACACCCCCG TCGGCATCAC CGTCACCGCC
GCCTCGTTCA TCGCCGACGA GGCCAAGGCG ATCGGCGCCT TGATCGACGC CGGAACCTTG
CGACGCTCGC GCTTCGCCGG TTTCCTCGAG TCCCTGCGCG AGTCGTCGAC CCTTTTGCTC
TCCAACGCCA ATCGGGCGGC CGAACTGATC CAAAGCTTCA AGCAAGTTGC CGTGGACCAG
ACCAGCGACG AGCGGCGGAC CTTCGATCTT GGCCACTACG TCACCGAGGT GCTGATCAGC
CTGGGCCCGA GTCTGCGCAA GCTTCCCCAT CGCGTGACGG TCGATATCCC GCCCGGCATC
ATTCTGGACA GCTATCCCGG CGCCCTGGCC CAGATCCTGG CCAATATCGT GCTCAATGCC
CTCTCTCACG CCTTCCTTCC GCAAAGAGCC GGGCAGATCA CTGTGACGGC GCGCGAAACC
GAGGAGGAGG TGGTGGAGCT TCGGATCGCC GATAACGGCC GGGGCATGAG CCCCGAGGTC
CGCGATCAGG TGTTCGAGCC GTTTTTCACC ACCACCCGTG GCGCCGGCGG ATCCGGCCTT
GGCCTGCATA TCGCCTATAA TCTGGCCAAT CGCACCCTTG GCGGACGTAT CGGCGTTGAC
AGCGCACCGG GAGAAGGGAC GACATTCATC GTGATCATCC CCCGAGTCGC CCCCCCCGCG
CCGCGGGCCC TTCGCTCAAG CGGTACCGTG ATCCACGGAC AATAA
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| Protein sequence | MAWRLSVRMR LLAVFGVAAL FAVIASAMGL LAFGSVERAQ KSFLESRLPT VELAQSLAHR
AQAVAAAAPQ MVIASTQAGR DSAGAQISTQ IANLDRLLVA LRPRVSDRSF LEQLEAQKAD
LTEALKALDH WVGRRIGLRR KLDERLSEAR DRLNEARALL AHRLAKSSPA DDQPVRLAMA
LVSIERAATL LEALPLAAAG RLAWLESAFG AELTMAARDS EGDGSWEGAG EVRGALAAAE
ALARGPEGLF ATRDGLEEAE RRCEALLVAY SQFANRLVYS ADTLAAETAA VMNADGRSLT
ATLGLISLIL LAIAALAVGG ALVMALFADR TISGRLATLR QSMAAHVAGL DAPLPDLGRD
EIGEMAQALK IFVATIADRE GALKASQDYL RAVLDAVPEG ILTITDTGEV VGASRSAESL
FGPGPGLIGK ELSLLISDAE GGRLSLEGAE SAGAPQAVIA HRADGDSFPG EITVAGILRD
DRQIHVLSLR DISERQRIEA ERQRFVALLA AAQEATADGL MVIDLDGAII TCNQKYYDTV
GISPDAFVPR SRDERLALLA GLMAEPQYFI DRIEEMEADP DLTAYDILHL ADGRLIERYS
SPFKVGGILA GRLWSVRDIT EREKARAELT EAKEAAERAL SDLKDAQRNL VEAEKMAALG
QLVAGIAHEI NTPVGITVTA ASFIADEAKA IGALIDAGTL RRSRFAGFLE SLRESSTLLL
SNANRAAELI QSFKQVAVDQ TSDERRTFDL GHYVTEVLIS LGPSLRKLPH RVTVDIPPGI
ILDSYPGALA QILANIVLNA LSHAFLPQRA GQITVTARET EEEVVELRIA DNGRGMSPEV
RDQVFEPFFT TTRGAGGSGL GLHIAYNLAN RTLGGRIGVD SAPGEGTTFI VIIPRVAPPA
PRALRSSGTV IHGQ
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