Gene Rru_A0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0416 
Symbol 
ID3833827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp492577 
End bp493314 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID637824500 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_425508 
Protein GI83591756 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATC TGACCGGCAA GAAAGCCCTG GTGACCGGGG CGTCTGGTGG GCTGGGTGCG 
TCGATCGCCA AGGCTCTGGC CGATCGCGGC GCCAGCGTCG CCCTGTCGGG GACCCGCGAG
GCGGCCTTGA ACGAGACCGC CGTGTTCCTG GGCAAGGACG TGCCCATCCT GCCCTGCGAC
CTGTCCGACA CCGCTGCGGT CGAGCGGCTG ATCCCGGCGG CCGAAGCCGC CCTCTCGGGT
CTTGATATCC TGGTCAACAA CGCCGGATTG ACCCGCGACA TGCTGTCGAT GCGGATGAAG
GACGAGGAAT GGGATCAGGT GATCGCCGTC AACCTCAGCG CCGCCTTCCG CCTGTCGCGC
TCGGCGGTGA AGGGCATGAT GAAACGGCGC TGGGGCCGCA TCGTCAATAT CACCTCGATC
GTCGGCGTCA CCGGCAATCC CGGTCAGGCC AATTACGCCG CCTCCAAGGC CGGCCTGATC
GGCCTGAGCA AGTCGATGGC CGCCGAAGTG GCGGCGCGCC ACATCACCGT CAATTGCGTG
GCGCCCGGTT TCATCGCCAC GGCGATGACC GATAAGTTGA ACGAAAAGCA AAAAGAGGCC
ATCTTGCCCC ATATCCCCGC CGGACGCATG GGGGCGCCCG AGGACGTGGC CGCCGCCGTC
GTTTATTTGG CGAGCGAAGA GGCGGCCTAT GTCACCGGCC AGACCTTGCA TGTCAACGGC
GGCATGGCGA TGATTTGA
 
Protein sequence
MFDLTGKKAL VTGASGGLGA SIAKALADRG ASVALSGTRE AALNETAVFL GKDVPILPCD 
LSDTAAVERL IPAAEAALSG LDILVNNAGL TRDMLSMRMK DEEWDQVIAV NLSAAFRLSR
SAVKGMMKRR WGRIVNITSI VGVTGNPGQA NYAASKAGLI GLSKSMAAEV AARHITVNCV
APGFIATAMT DKLNEKQKEA ILPHIPAGRM GAPEDVAAAV VYLASEEAAY VTGQTLHVNG
GMAMI