Gene Rru_A0414 details

Gene Information

• Locus tag: Rru_A0414
• Symbol: rpsF
• ID: 3833825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 490754
• End bp: 491236
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637824498
• Product: 30S ribosomal protein S6
• Protein accession: YP_425506
• Protein GI: 83591754
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCTTT ACGAATGCGT GCTGATCGCA CGCCAGGACA TCTCCAATGC CCAGGTTGAT 
ACCATGGGTG ACGAGGTCTC CGCGATCCTC TCCGAAGGGG GCGGGTCGGT GAGCAAGCGG 
GAATATTGGG GTCTGCGGAC TCTGAATTTC CGCATCAAGA AAAACCGGAA GGGTCACTAC 
CTTCTTCTCA ACATCGACGC TCCGGCGCCG GCCGTCCACG AACTGGACCG CCGCCTGCGC 
CTGAACGAAG ATGTCATCCG CCACATGACC GTCAAGGTCG AAGAGCTTGA AGAAGCTCCG 
TCGGCGATGA TGCAGAAGAA CGACCGTCCC GAGCGCGGCG GCCGTCGCGG CGATCGCTTT 
GGTGATCGTC CCGAGCGTGG CGATCGTCCC GACCGCGGTG ATCGCGGTGG CGACCGTGGT 
GGTGATCGGG GCGACCGTGC CCCCCGGGGC GAGCGTCGCC CCTTGCGAGA AGGAGCTGAA 
TGA 

 

Protein sequence

MALYECVLIA RQDISNAQVD TMGDEVSAIL SEGGGSVSKR EYWGLRTLNF RIKKNRKGHY 
LLLNIDAPAP AVHELDRRLR LNEDVIRHMT VKVEELEEAP SAMMQKNDRP ERGGRRGDRF 
GDRPERGDRP DRGDRGGDRG GDRGDRAPRG ERRPLREGAE