Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0407 |
Symbol | |
ID | 3833818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 484440 |
End bp | 485213 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637824491 |
Product | ABC transporter component |
Protein accession | YP_425499 |
Protein GI | 83591747 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA CTCCCAAAAT CGAACTGCGC GGCCTGAAAA AGGCCTTTGG CCCGAAAGTC GTGCTTGATG GCGTCGACCT GACGGTCGGC GCCGGCGAAT CGGTGGTGAT CATCGGCGGC TCGGGAACGG GCAAATCCGT GGCCTTGAAA TGCATTCTCG GCCTGCTGCG CCCCGACAGC GGATCGATCC TGATCGATGG TCAGGAGACC GTTGGCCTGC GCGGCCAGGA TCGCGACAAG GTCATGGCCA AATTCGGCAT GTTGTTCCAG GGCGCGGCGT TGTTTGACAG CCTGCCGGTC TGGCAGAACG TCGCCTTCGG CCTGTTGCAG GGCCAGCGCA TGCCGCGCCG TCAGGCCAAG GAGATCGCCA TCACCACCCT GGCCGAGGTC GGGCTTGGCG CCGATGTCGC CGATCTCAGC CCGTCTGAGC TATCGGGCGG CATGCAAAAG CGCGTCGGGC TGGCGCGGGC GATCGCCACC AATCCCGAGA TCATCTTTTT CGACGAACCG ACCACCGGCC TTGATCCGAT CATGGCCGAT GTCATCAACG ACCTGATCCG CACCAGCGTC CGCCACCTGG GCGCCACCGC CTTGACGATC ACCCACGACA TGGCCAGCGC CAGCAAGATC GCCGACCGCA TCGCCATGCT CTATCAGGGA AAGCTGATCT GGGTCGGCCC GGCGAGCGAG GTCTATGACT CGGGCAATCC GTACGTCGAC CAGTTCGTAC ATGGCCGGGC CGAGGGCCCG ATCCGCGCCG GACTGCGCGA TTAG
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Protein sequence | MTDTPKIELR GLKKAFGPKV VLDGVDLTVG AGESVVIIGG SGTGKSVALK CILGLLRPDS GSILIDGQET VGLRGQDRDK VMAKFGMLFQ GAALFDSLPV WQNVAFGLLQ GQRMPRRQAK EIAITTLAEV GLGADVADLS PSELSGGMQK RVGLARAIAT NPEIIFFDEP TTGLDPIMAD VINDLIRTSV RHLGATALTI THDMASASKI ADRIAMLYQG KLIWVGPASE VYDSGNPYVD QFVHGRAEGP IRAGLRD
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