| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0394 |
|---|
| Symbol | |
|---|
| ID | 3833805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 469734 |
|---|
| End bp | 470972 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637824478 |
|---|
| Product | N-acetylglutamate synthase / glutamate N-acetyltransferase |
|---|
| Protein accession | YP_425486 |
|---|
| Protein GI | 83591734 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) |
|---|
| TIGRFAM ID | [TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00326429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG CCGTTTCGCC CCTCGCCCCC GCCGCCTTCC CGGCCCTGCC GGCCATCGCC
GGGGTTGATC TCGCCACCCA TAACACCGGC CTGCGCTATC AGGGCCGCCC CGACCTGCTG
GTCGTGCGGC TGGCCGCGGG CAGCACCGGG GCTGGCGTTT TCACCCGCTC CAAGACCCGC
TCGGCCCCCG TTGACTGGTG CCGCCGGGCC TTGGCCGCCG GCGGCGGCGC GGCCCGGGGG
CTGGTGGTCA ATTCCGGCAA CGCCAATGCC TTCACCGGCA GTCGCGGCAT CGCCAGCGTC
GAACGCACCA TCGCCAGCGC CGCCATGGCT TTGAGCTGCC CGCCCGAGGA GGTGTTCATC
GCCTCGACCG GTACCATCGG CGTGCCCCTG GACGACGCCA AGATCACCAC CTTGATCGAT
GCCATCGCCC CCAGCCTGGG CACGGCCAGT TGGTTCGACG CGGCGACGGC GATCAGCACC
ACCGACACCT ACCCCAAGGG CGCCACCCGC ACCGCCACCA TCGACGGCGT GAGCGTGACC
CTGAGCGGCA TCGCCAAGGG ATCGGGGATG ATCGCCCCGG ATATGGCGAC CATGCTGGCC
TATGTCTTCA CCGACGCCGC CCTGCCCGCC GGCGTGCTGC AAGACCTGCT GACCCAGGGC
GTGGAGCGGT CGTTCAACGC CATCACCGTC GACGGCGACA CCTCGACCTC CGACAGCCTG
ATGCTGTTCG CCACCGGCAA GGCCGGCAAC GCCCCGGTGC AAACGGCGCT CGACCGCCGG
CTGAGCGGCT TCCGCAAGGC CCTGTTCGCC CTGCTGACCG ATCTCGCCCA TCAGGTGGTT
CGCGATGGCG AGGGGGCGAC CAAATTCGTC ACCGTCACCG TCACCGGCGC CAAATCGCCG
CGCGCGGCCA AGCGCATCGG CTTGGCCATC GCCAATTCGC CGCTGGTCAA AACGGCGATC
GCCGGCGAGG ACGCCAATTG GGGCCGCATC GTCATGGCGG TGGGCAAATC GGGCGAGGAG
GCCGACCGCG ACAGGCTGGA AATCCGCATC GGCGGCCATC TGATCGCCGC CGAGGGTCAG
GCCGTGGCCG ATTACGACGA AGGCCCGGTG GCCACCCATA TGAAGGGAAC CGATGTCGAC
ATCGCCGTCG ATCTCGGCCT TGGCCGGGGC AAGGCCACCG TCTGGACCTG CGATCTGACC
CATGGCTACA TCGATATCAA TGCCGATTAC CGCACCTGA
|
|---|
| Protein sequence | MTHAVSPLAP AAFPALPAIA GVDLATHNTG LRYQGRPDLL VVRLAAGSTG AGVFTRSKTR
SAPVDWCRRA LAAGGGAARG LVVNSGNANA FTGSRGIASV ERTIASAAMA LSCPPEEVFI
ASTGTIGVPL DDAKITTLID AIAPSLGTAS WFDAATAIST TDTYPKGATR TATIDGVSVT
LSGIAKGSGM IAPDMATMLA YVFTDAALPA GVLQDLLTQG VERSFNAITV DGDTSTSDSL
MLFATGKAGN APVQTALDRR LSGFRKALFA LLTDLAHQVV RDGEGATKFV TVTVTGAKSP
RAAKRIGLAI ANSPLVKTAI AGEDANWGRI VMAVGKSGEE ADRDRLEIRI GGHLIAAEGQ
AVADYDEGPV ATHMKGTDVD IAVDLGLGRG KATVWTCDLT HGYIDINADY RT
|
|---|
| |