| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0340 |
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| Symbol | |
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| ID | 3834058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 411275 |
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| End bp | 413932 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637824423 |
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| Product | CRISPR-associated helicase Cas3 family protein protein |
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| Protein accession | YP_425432 |
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| Protein GI | 83591680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGGTA TTGGGGGCTG GGCTTTGAAC GATGTCACCG GTTCGGCGGC AGAGCAAAAC
CAAGAAAGCC GCAAGGGGCT TTATGGCGCG CCTTGGGGAA AATCGAGGGA CGGGGAAAGC
CATCATCTGG CCCATCACTG CGCCGATGTG GCAGCCTGCT TCGAGGCCAT GGCCGCGCTG
CCCGGAGTGC GGAGCCGATT GGAACGGGCC GCAGGCGGTC CCCTTTCCGA GGTCGATATC
GCCCGCCTTG CCGTTCTGGT TTTCCTTCAC GACATAGGCA AGCTGCATCC GGGGTTTCAA
GCGAAGGCTT GGCCGGAGGG CTTATGGACG GGGCCCCGGC ACGGACATAT GCGGGAAGGC
GTGGAGATTT TCCAGCACCA AGCCCCCCCG GACATTGTCC GCAGCCTGCA TCTGGAAAAG
CTGATCGAGT GGGGTGTCGA TTGGAATCTG CTTTTCTCCG TCCTTGCCCA CCATGGTCGT
CCGGTTTCCA TGGAAGGAGG ACGCCCCCCT TGTTGGCGGG CCGTGGCGAA AGCCGGCTAT
GACCCTGGTG CGGCTTCGGC TGAAGTCGGC GGTCTCATCC CCCGTTGGTT TGCCGGCGCC
TTTGTCCAAG ACGGTCGGCC GCTTCCCTCG ATGGTGGGGT TTGCCCATCT GTTTTGTGGC
TTTGTCTCGC TTGCCGACTG GTTGGGGTCG ACAAGGGCGG TCTTCCCGTT CAAGGCCGAG
CTTGATGTCG ATTACATGGA GAAGGCCCGC AAAAAAGCCG GCGCTGCGGT GGCGGCCATT
GGCCTCGATC CCCGCGCCCT CCAGCGTAAG GCGGCGGGGC GGGCCGATTT CGCCACCCTT
ACCGGCATAG ACACCCCACG GCCCCAGCAA CAGCTGGTCG GCGCGTTTCC CCTTGCCGAA
CCCCTTGTCA TTCTTGAAGC CGAAACCGGA TCGGGCAAGA CGGAAGCCGC GTTGTGGCGT
TTCGTCCTGC TGTTTGCGGC GGGAAAGGTG GACAGCCTCT ATTTCGCCCT CCCCACGCGC
GCCGCGGCCA TCCAACTCCA CGCCCGGGTG AACAAGGCGA TGGCGCGGGT CTTTGGCGCC
GATGCGCCGG AGGCCGTTCT CGCGGTTCCC GGCTATCTGA AATCCGGGGT GGTTGGCGGG
CATGCCCTGC CTGACTGGGG GGTGCGCTGG GATGACGATG GCGGTCTTGA CGAGAGCCGC
CTTCTGGCCC GGTGGGCGGC GGAAAGCGCC AAACGCCATC TGGCGGCGAC CATCGCCGTT
GGAACCGTCG ATCAGGCCAT GCTCGCCGCT TTGCAGGTCA AGCATGCCCA TCTCCGGGGG
GCCGCCCTTT CGCGCAGCCT GCTAGTAATA GACGAAGTTC ATGCCTCTGA TCGCTATATG
GTTGAAGTAC AGACCCATCT GCTCGCCATG CATCTCGGGC ACGGTGGTCA GGCCATGCTG
ATGTCGGCGA CGCTGGGATC GCTGGCACGG ACGAAGTGGC TGGGGCGCAA GACTTCCCCG
TCTTTTGAGG AGGCGGTGGC CACGCCCTAT CCGGCCGTTT GGGGCAAGGG AGAGGTCGCG
CCGCGCGGGG GGATCGGCAA GGGCGGGGAG AAATCCGTCG CCATCGGGCT TGTTCCGTCG
TGGACGGCGG AAACGGCGGC GGCCCTGGCG ATCGACGCGG CGCGCTCCGG GGCGCGGGTG
CTTGTCGTGC GCAACACCGT GCGGGCGGCG ATTTCAACCT TCGACCGGGT CCGGCAAGCC
GGCGGCGAGG ATTTGTTGCT GACGGTGGCC AAGGGTCCGG CTTTGCATCA CGGCCGGTTC
GCCCCCGAGG ATCGCGCCCT GCTTGATGGG GCGGTGGAGG CGGCCTTGTC TGTTGATCAG
GCAACGCGCA CACCGGGCGG GCGGATCGTC ATCGGAACGC AAACGCTCGA ACAAAGCCTT
GATATCGATG CCGACTTTCT GATCACGGAC CTGTGTCCCG TCGATGTGCT GCTGCAACGC
ATCGGGCGGT TGCATCGCCA TGCCCTGAGC CGGCCGTCCG GCTTCGAGGT CCCCCACTGT
CGGGTTCTGA TGCCCGAGCA GGGATTGGAG ATATTTCTGC CTCCCTTTTT CGAGAACGGG
CTGGGGGGAT GGGACGAGCG GGGTGTTCTG AACGGCATCT ACCGCGACCT CTCCGTGCTT
GAACTGACCC GGCGCCTGAT CGCGGCTTAC CCCGAATGGC GCATCCCGGC GATGAACCGG
TTTCTGGTCG AAAGCGCAAC CCATCCCGAG CGCATCGAGG CGCTGCATAG GGAACTGGGG
CGGCCCTGGG AAACCTATTG GGCCAATGTA TGTGGCAAGG ACATCGCCGA TGCCGGCGCG
GCCAGAAACA TCGCCCTGCC GATCGGCACG CCCTTCGCCG ACATGAGGTA CCCAGACCCC
GACAAGGAAG AGAGAATCCG CACGAGACTG GGGGCGGAGG GAGCCCGGAT TCTTTTTTCC
GGCCCGGTCT GCGGCCCCTT CGGAGTCGAG ATCAGTGGCG TGACCCTGCC GCCCCCCTGG
TCCCATGGGA TCGACGGCGG GACGGTGGTG GCGCCGATCG CTTTGGATGG GGTGTTGCAT
TTCCAAGCCG GAGGGACCAA ATTCGAGTAC GGACGCCGCG GTACGGTTAG ATCTTACAGG
TTACTTGAAA TATCCTGA
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| Protein sequence | MRGIGGWALN DVTGSAAEQN QESRKGLYGA PWGKSRDGES HHLAHHCADV AACFEAMAAL
PGVRSRLERA AGGPLSEVDI ARLAVLVFLH DIGKLHPGFQ AKAWPEGLWT GPRHGHMREG
VEIFQHQAPP DIVRSLHLEK LIEWGVDWNL LFSVLAHHGR PVSMEGGRPP CWRAVAKAGY
DPGAASAEVG GLIPRWFAGA FVQDGRPLPS MVGFAHLFCG FVSLADWLGS TRAVFPFKAE
LDVDYMEKAR KKAGAAVAAI GLDPRALQRK AAGRADFATL TGIDTPRPQQ QLVGAFPLAE
PLVILEAETG SGKTEAALWR FVLLFAAGKV DSLYFALPTR AAAIQLHARV NKAMARVFGA
DAPEAVLAVP GYLKSGVVGG HALPDWGVRW DDDGGLDESR LLARWAAESA KRHLAATIAV
GTVDQAMLAA LQVKHAHLRG AALSRSLLVI DEVHASDRYM VEVQTHLLAM HLGHGGQAML
MSATLGSLAR TKWLGRKTSP SFEEAVATPY PAVWGKGEVA PRGGIGKGGE KSVAIGLVPS
WTAETAAALA IDAARSGARV LVVRNTVRAA ISTFDRVRQA GGEDLLLTVA KGPALHHGRF
APEDRALLDG AVEAALSVDQ ATRTPGGRIV IGTQTLEQSL DIDADFLITD LCPVDVLLQR
IGRLHRHALS RPSGFEVPHC RVLMPEQGLE IFLPPFFENG LGGWDERGVL NGIYRDLSVL
ELTRRLIAAY PEWRIPAMNR FLVESATHPE RIEALHRELG RPWETYWANV CGKDIADAGA
ARNIALPIGT PFADMRYPDP DKEERIRTRL GAEGARILFS GPVCGPFGVE ISGVTLPPPW
SHGIDGGTVV APIALDGVLH FQAGGTKFEY GRRGTVRSYR LLEIS
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