| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0326 |
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| Symbol | |
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| ID | 3833681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 396246 |
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| End bp | 398447 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637824408 |
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| Product | NifA subfamily transcriptional regulator |
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| Protein accession | YP_425418 |
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| Protein GI | 83591666 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.399529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGAGG CGCACAGTCT GGCGGAACGC TACGAACTGT TGCTCGATGT GTCGGAGATT
CTCGAGCTGA ACCGCGATCT AAATTCGCTG CTCGGCGCGC TTTGCGACCT GCCGGCCAGC
ATTGGTCTGT TCGATTATGT CAATCTGCTG CTCTATGACG CGCCCACCGA TACGATGACG
TTGTTTTCGC AGGGCGATGT CGGCGGCGGC TATGCGCGGA TCGACGGTCT CGCCCCGACC
GAGGGACCGG GGCAGGTGGT CTGGGCCCGT CAACGTCCCT TCGTGTGCAG CGGCGAGGAA
TACCGCCGGC ATTTCCTGAA GATCGCCGCT CTGCGCCGCA ACCAGCGGGT CGGACTGTAT
TGTCAGATGC CGCTGACCAC CAGCCAGCGC CGGCTGGGCG GGGTGGAATT CATCAGTTCA
CGCCCCACTA CCTATGACGA GGATGATCTG ACCTTCCTGC GCCGGGTCGC CTCGGTCATC
GCCATTTCGG TTGAAAACGC CCTGATCGGC GAAATGCGCC AGATGGAGGA GGAGCGTCTG
CGCGGCGAAC GCGATCACAA CCACATTCTG GTCGAGGTGA CCAATGCGGT GATTTCCAAG
CTGAAGCTGG AGGATCTGGT CGACGAGGTG TCGCGCTCCA TTCACCGGTT TTTCGGCGTC
GATTTCGTCT CCCTCGATCT GGTCGATCCG GCCACCGCCA CCATCAAATC GCGCTCGGTC
TATTTCCAGA AGGGGTTGGG GCCGGTCTGG GGCTCGGCCC AGGGGCCGCT TGGCGCCTCG
CCGATGGCAC CCTTGTTCGA GACCAAGGCG CCGCGCATCC TGGCCCGCGC CGATCTGGGG
GCCCTGGCGC GCGGCCATGA TCAGATGACC TTGCTGACCA ACGCCGGTTT CCAAGTGGCT
TGCGGTATCC CGTTGCTTTC GGCGGGGCAT GTTCTGGGGG TGCTGACCCT GGCCAGCCGC
GAGCGCGACA AGTTCACCGA TTACAATATC GGCTTGCTGG GCGAGGTCGC CTCGCGCATT
TGCATCGCCG TGGAAAACGC CCTGGCTTAC GGCGAGATTT CCCGGCTCAA GGACCAGTTG
TCGCGCGAGA ACAAGCAACT GGCCAAGGAA CGCTATTACC TGGAAGAGGA AATCCGCCGC
ACCGAGGATT TCGGCGATAT CATCGGCATC AGCCCGGCCA TTCGCGGCGT TCTCGAACAG
GTGGAGCTGG TCGCCGACAG CGACAGCACG GTGCTGATCC TCGGCGAGAC GGGCACGGGC
AAGGAACTGA TCGCGCGCGC CATCCATATG CTGAGCCAGC GCAAGAAGCG CACGATGATC
AAGGTGAACT GCGCGGCCAT TCCCTCGGCC CTGCTGGAAA GCGATCTGTT CGGCCATGAA
AAAGGCGCCT TCACCGGCGC CATCGCCCAG AAGTCCGGCC GCTTCGAACT GGCCGATCGC
GGCACGCTGT TTCTTGACGA GGTCGGCGAC ATCCCCATCG ATCTGCAGCC CAAACTGCTG
CGCGCCTTGC AGGAGCGCGA AATCGAGCGG GTCGGCGGAC ATCAGCCGAT CCCAGTGGAT
GTGCGGATGA TCGCCGCCAC CAACCGCGAC CTGACGGGCA TGGTCGAGAA GCGGCTGTTC
CGGGGCGATC TGTATTATCG CCTGAACGTC TTTCCGATTC TGATCCCGCC TTTGCGCGAG
CGCCGCGAGG ATATTCCGCT GATGGCGGAT TATTTCATGC GCAAGACGGC GCGCAAGATG
AACCGGGCGA TCGAGGCCTT CTCGGCCGAA ACCATGGATA TGCTGCTTAA CTTGCCGTGG
CCGGGCAATG TGCGCGAGCT GCAAAACGTC ATCGAGCGCG CGGTCATCCT GACCAAGGGG
CCGGTGCTGC ATCTGCCCGC CACCGAACTG CGCCATCATC TGGCGCCCAG CGCCGCCCTG
CCGTCCGAAG ACGCGGTGAT TCCTCTCCGC GCCGCGGTGC TGCCCTCCGC CGCGAGCGCG
CCCGATCCGC TCCCGCCCCC GGCCGGGTCG TCCCCCAATC CCGGCGATCT CGCCGGCGAG
GCGATCGAGC GCGACCAGAT CTTGCGAGTA TTGCGCGAAA CCAATGGCAT CGTCGGTGGT
CCGCGCGGCG CGGCGGCCCA TCTCGGAATG AAGCGGACCA CCTTGCTGTC GCGGATGCGC
CGCCTTGGCA TCTCGCCCAA GGAGGTCGAT CACCGCGCGT GA
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| Protein sequence | MGEAHSLAER YELLLDVSEI LELNRDLNSL LGALCDLPAS IGLFDYVNLL LYDAPTDTMT
LFSQGDVGGG YARIDGLAPT EGPGQVVWAR QRPFVCSGEE YRRHFLKIAA LRRNQRVGLY
CQMPLTTSQR RLGGVEFISS RPTTYDEDDL TFLRRVASVI AISVENALIG EMRQMEEERL
RGERDHNHIL VEVTNAVISK LKLEDLVDEV SRSIHRFFGV DFVSLDLVDP ATATIKSRSV
YFQKGLGPVW GSAQGPLGAS PMAPLFETKA PRILARADLG ALARGHDQMT LLTNAGFQVA
CGIPLLSAGH VLGVLTLASR ERDKFTDYNI GLLGEVASRI CIAVENALAY GEISRLKDQL
SRENKQLAKE RYYLEEEIRR TEDFGDIIGI SPAIRGVLEQ VELVADSDST VLILGETGTG
KELIARAIHM LSQRKKRTMI KVNCAAIPSA LLESDLFGHE KGAFTGAIAQ KSGRFELADR
GTLFLDEVGD IPIDLQPKLL RALQEREIER VGGHQPIPVD VRMIAATNRD LTGMVEKRLF
RGDLYYRLNV FPILIPPLRE RREDIPLMAD YFMRKTARKM NRAIEAFSAE TMDMLLNLPW
PGNVRELQNV IERAVILTKG PVLHLPATEL RHHLAPSAAL PSEDAVIPLR AAVLPSAASA
PDPLPPPAGS SPNPGDLAGE AIERDQILRV LRETNGIVGG PRGAAAHLGM KRTTLLSRMR
RLGISPKEVD HRA
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