Gene Rru_A0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0319 
Symbol 
ID3833674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp388811 
End bp389476 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID637824401 
ProductNADH-ubiquinone oxidoreductase, chain 4L 
Protein accessionYP_425411 
Protein GI83591659 
COG category[C] Energy production and conversion 
COG ID[COG4237] Hydrogenase 4 membrane component (E) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.500767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGCG GCGCGACGAT CTATATAAGT CTTCTTCTTA TCGTAACCTC GTTTGTCGTT 
GTCGAATGGC GTTATCTGAA AGGGGCGATC TTCACCTATC AGTGCCAGTC GGTGCTGATG 
GCCCTGATGT TCGTTCTCTA CGGCACGGCG CTTGATAACC ACGCCCTTTA TTATTGGGCC 
GGCACCGCGC TGGTCAGCAA GGGGGTGATC ATTCCCTGGC TGCTGCGCCA ATACGTGAAC 
AAGGTCGGCG CCGAGGAGAC CCGGCCGATG ATGGGGGCGG CGCTGTCGTT CATCCTCGCC 
GTGGTCGTCG CCGCCCTGGC CTTCTGGTGG ACCTTCAACC ACCACGACGA TCTGGTCATC 
ACCGCCGAGC TGATCGGCGA GCCCTACCGG CTCAATCTGG CGGTGGCGGC GGTGGTTCTG 
GTGATCGGCT TCTACGCCCT GCTCACCCGC CGCGACGCCT TCAAGATCGT CATCGGTCTG 
TGCCTTCTGG AAAACGCCGT CCACCTGAGC CTCGCCAGCC TGGCGCCGAC CATCGCCGAG 
ACGGCGATGA TCGGGGTGGT CACCGATGTC GTGATCTCGG TGTGGATGAT GCTTTACGTC 
GTCCGCTCGA TCTACGGCGC CGTCGGCTCC ACCGACACCA CCAATATTTC GCAGCTGAAT 
GGCTGA
 
Protein sequence
MASGATIYIS LLLIVTSFVV VEWRYLKGAI FTYQCQSVLM ALMFVLYGTA LDNHALYYWA 
GTALVSKGVI IPWLLRQYVN KVGAEETRPM MGAALSFILA VVVAALAFWW TFNHHDDLVI 
TAELIGEPYR LNLAVAAVVL VIGFYALLTR RDAFKIVIGL CLLENAVHLS LASLAPTIAE 
TAMIGVVTDV VISVWMMLYV VRSIYGAVGS TDTTNISQLN G