| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0293 |
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| Symbol | rpsA |
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| ID | 3834448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 358078 |
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| End bp | 359799 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637824373 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_425385 |
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| Protein GI | 83591633 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATT CAGCCCAGGA TCTGGCCTTC ACGGCCGAGA ATTTCGAGTC GTTGCTGAAC
GAGCAGCTCG GTGAATCGGG CGGCCTCGAG GGTTCGGTGC TCACCGGCAC CGTCATTGGT
GTTTCGGGCG ATTTCGCCGT GGTCGACGTC GGGCTCAAGT CCGAAGGCCG CGTGCCGCTC
AAGGAATTCT CCCGTGGTGG CGACGACGCC GAGATCAAGA TCGGCGATAC CGTCGACGTG
TTCGTCGAGC GCTACGAGGA CAAGGACGGC CTGATCGTCC TGTCGCGCGA CAAGGCGCGG
CGCGAAGAGG CTTGGAACGA GCTCGAGAAG GCCTTCAACG ACAACCAGCG GGTTCGCGGC
CTGATCCACA GCCGGGTCAA GGGCGGCTTC ACCGTCGATT TGTCGGGTGC CATCGCCTTC
CTGCCGGGCA GCCAGGTTGA TATCCGCCCC GTCCGCGACA TCGGCCCGCT TCTCGGCCAG
CCCCAGGTCT TCCAGATCCT CAAGATGGAC CGGGCCCGTG GCAACATCGT CGTGTCGCGC
CGCGCCGTTC TCGAAGAGAC CCGCGCCGAG GAACGCTCCA AGCTCATGGA GACCCTGCGC
GAGGGCGAGA TCCTCGAAGG CGTCGTCAAG AACATCACCG ATTACGGCGC GTTCGTCGAT
CTGGGCGGTG TGGACGGCCT GCTGCACGTC ACCGACATCT CCTGGAAGCG TATCAACCAC
CCGACGGAAG CCCTGTCGAT CGGCCAGACC GTCAAGGTCC AGGTCATCCG CTTCAACGCC
GAAACCCAGC GCATCAGCCT GGGCATGAAG CAGCTTGAAG CCGATCCGTG GGAAGGCGTC
GCCGCCAAGT ACCCCGTCGG CACCAAGTTC GTTGGCCGCG TGACCAACAT CACCGATTAC
GGCGCGTTCG TCGAACTCGA GCCCGGCGTC GAAGGCCTGG TTCACGTTTC CGAAATGTCC
TGGACCAAGA AGAACGTCCA CCCGGGCAAG ATCGTCTCCA CCAGCCAGGA AGTCGAGGTG
ATGATCCTCG ACGTCGATCC CGACAAGCGT CGGATCAGCC TGGGCCTGAA GCAGACGATG
GCCAACCCGT GGTCCGAGTT CCTCGAAGGC CACCCGATCG GCACCGAAGT CGAAGGCGAG
ATCAAGAACA TCACCGAATT CGGTCTGTTC ATCGGTCTGA CTGGCGACAT CGACGGCATG
ATCCACCTGT CCGACCTGGA CTGGAACCGC AGCGGCGACG AGGCGGTGAA GGACTACAAG
AAGGGCGACG TGGTGCAGGC CAAGGTTCTC GACGTCGACG TCGAGAAGGA GCGCATCAGC
CTGGGCGTCA AGCAGCTGGG CGAGGATCCC TACCGGGAGG CCACCGCCGA CCTGCGCAAG
AACCAGATCG TCACCTGCGT CATCACCATG GTGCAGGAGA ACGGCATCGA GGTTGACGTC
AACGGCGCCA TCGGCTTCAT CCGCAAGTCC GATCTGGCCC GCGAGCGCGC CGATCAGCGG
CCCGAGCGTT TCGCCGTCGG CGAAAAGGTC GATGCCAAGG TCATCAACAT GGACAAGTCC
AACCGTCGCA TGACCCTGTC GATCAAGGCC CGCGAGATGG ACGAGGAAAA GCAGGCGATG
GCCGAATACG GCTCCGCCGA CTCGGGCGCC TCGCTCGGCG ATATCCTTGG CGCCGCCCTC
AAGCAGGCCC AGGAAAAGGC CCGCACCGGC GACGACGAGT AA
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| Protein sequence | MADSAQDLAF TAENFESLLN EQLGESGGLE GSVLTGTVIG VSGDFAVVDV GLKSEGRVPL
KEFSRGGDDA EIKIGDTVDV FVERYEDKDG LIVLSRDKAR REEAWNELEK AFNDNQRVRG
LIHSRVKGGF TVDLSGAIAF LPGSQVDIRP VRDIGPLLGQ PQVFQILKMD RARGNIVVSR
RAVLEETRAE ERSKLMETLR EGEILEGVVK NITDYGAFVD LGGVDGLLHV TDISWKRINH
PTEALSIGQT VKVQVIRFNA ETQRISLGMK QLEADPWEGV AAKYPVGTKF VGRVTNITDY
GAFVELEPGV EGLVHVSEMS WTKKNVHPGK IVSTSQEVEV MILDVDPDKR RISLGLKQTM
ANPWSEFLEG HPIGTEVEGE IKNITEFGLF IGLTGDIDGM IHLSDLDWNR SGDEAVKDYK
KGDVVQAKVL DVDVEKERIS LGVKQLGEDP YREATADLRK NQIVTCVITM VQENGIEVDV
NGAIGFIRKS DLARERADQR PERFAVGEKV DAKVINMDKS NRRMTLSIKA REMDEEKQAM
AEYGSADSGA SLGDILGAAL KQAQEKARTG DDE
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