| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0290 |
|---|
| Symbol | |
|---|
| ID | 3833849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 356090 |
|---|
| End bp | 356974 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637824370 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_425382 |
|---|
| Protein GI | 83591630 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.392401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTA TCGTCTTTCC CGTCATCGCC CCGGTTTTGA TCGTGGTCGC GGTGGGCTTC
GGCTGGGCGC GGGCCGGCCG GCCTTTCGAT ACGGCGACGG TTTCCGCCCT TGGTCTGGGC
CTGGGAACGC CCTTCCTGCT GACCGATGTG CTGATGAGCG CCAATATCGC CGCCGACGCC
CTGGCGGCGA TGGGGTTGGC CGCCTTGCTG ACCCTGGCCG GCATGGCGGT GGGCGGCGCC
CTGACCCTGC GGCTGCTCAA GCTTCCCCAG GCGGTGTTCC TGCCCAGCAT GATCTTTGGA
AATACGGGCA ATATCGCCCT GCCGCTGTGT CTTTTCGCCT TTGGCGACGA GGGGCTGGCG
CTGTCGATCG GCTATTTCAC CGTGGTCATC GTCATCCAGT TCTCGGCGAC GGCGCTGATT
TCGTCGGGCG AGCGGCCGGT TCCGGTGATC TTGCGCAATC CGGTGATCTG GACCCTGCTG
GTCGTCGGCA CCCTCAAGGC CGGTGGCATC GCCTTGCCCG GCTGGCTGGC CGATACCGCC
CATATGGTCG GGGGCATGTG CATTCCGGTG ATGCTGCTGG CCCTGGGGGT GTCGCTGGCC
CGGCTGAAGG TCGCCGGCCT AGGCGTCGCC TTGCTGCTGG GCGCGGTGAA GATCGCCCTG
GGGGTGGCCT TGGGCTATGC CACGGTGCTG GCCCTTGATC TGCACGGCGC GGCGCGGGGC
GTGGTGCTGA TCCAATCGGC GATGCCGCCG GCCGTCTTCA ACTATCTGTT CGCCGCCCGC
TACAACCAGC GCCCCGAAGA GGTGGCCGGG CTGGTGATCG TTTCGACCGG CTTGAGCGTT
CTGACCATGC CGTTGCTGTT GTGGGGGGCG ATGGCCGATA TGTGA
|
|---|
| Protein sequence | MFSIVFPVIA PVLIVVAVGF GWARAGRPFD TATVSALGLG LGTPFLLTDV LMSANIAADA
LAAMGLAALL TLAGMAVGGA LTLRLLKLPQ AVFLPSMIFG NTGNIALPLC LFAFGDEGLA
LSIGYFTVVI VIQFSATALI SSGERPVPVI LRNPVIWTLL VVGTLKAGGI ALPGWLADTA
HMVGGMCIPV MLLALGVSLA RLKVAGLGVA LLLGAVKIAL GVALGYATVL ALDLHGAARG
VVLIQSAMPP AVFNYLFAAR YNQRPEEVAG LVIVSTGLSV LTMPLLLWGA MADM
|
|---|
| |