Gene Rru_A0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0253 
Symbol 
ID3833924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp314880 
End bp315950 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID637824332 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_425345 
Protein GI83591593 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGA AGGTTGCGCT TATTACCGGG GTGACGGGGC AGGACGGCGC CTATCTGGCG 
GAATTCCTGC TGGGCAAGGG CTATGAGGTC CACGGCATCA AGCGGCGGTC GTCGTCGCTC
AACACCGGGC GGATCGATCC GCTTTATCAA GATCCCCACG ATCCCGACCG CACGTTCTTC
CTGCATTACG GCGACATGAC CGACAGCGCC AATCTGATCG GGCTGGTTCA GGCCATTCAG
CCCGACGAGA TCTATAATCT CGCCGCGCAA AGCCATGTCC AGGTCAGTTT CGAGATCCCC
GAATACACCG CCAATGCCGA TGCGGTCGGC ACCTTGCGCC TGCTCGAGGC GATCCGTTTG
CTTGGGCTGA CCGACAAGAC GCGGTTCTAT CAGGCCTCGA CTTCCGAGCT TTACGGCAAG
GTGCGCGAGA CGCCGCAAAG TGAAACCACG CCGTTTTATC CGCGCAGCCC CTATGCGGCG
GCCAAGCTTT ACGCCTATTG GATCACGGTG AACTACCGCG AGGCCTATGG CATTCACGCC
TCGAACGGCA TTCTTTTCAA TCATGAAAGC CCGCTGCGCG GCGAAACCTT CGTGACCCGC
AAGATCACCC GGGCGGTGGC GGCCATTCAT CTTGGACTGC AAGACGTGCT TTATCTGGGC
AATCTCGACA GCTGGCGTGA CTGGGGCCAT GCGCGCGACT ATGTGAAAGG CATGTGGGCG
ATGCTTCAAC AACCCCGCCC CGATGACTAT GTCTTGGCGA CGGGGGTGGT CCATTCGGTT
CGCGCCTTCG TGGAAATGGC TTTTTCCAAG CTGGGGCGCC GCGTGACATG GCAGGGCGAG
GGGGTCGACG AGATCGGGAT CGACAGCGCC AGCGGCGCCA AACTGGTGGC CATCGATCCC
CGTTATTTCC GGCCGACCGA GGTCGAGTTC CTGCAAGGCG ATCCGACCAA GGCCCGCGAG
CGTCTGGGCT GGGTCGCCGA AACCCCGCTT GCCGAGTTGG TCGCTGAAAT GGTCGCCGCC
GATCTCGCCG TGCTCAAACG CACCCAGGAG AGTCTGATCA CCAATGACTG A
 
Protein sequence
MAAKVALITG VTGQDGAYLA EFLLGKGYEV HGIKRRSSSL NTGRIDPLYQ DPHDPDRTFF 
LHYGDMTDSA NLIGLVQAIQ PDEIYNLAAQ SHVQVSFEIP EYTANADAVG TLRLLEAIRL
LGLTDKTRFY QASTSELYGK VRETPQSETT PFYPRSPYAA AKLYAYWITV NYREAYGIHA
SNGILFNHES PLRGETFVTR KITRAVAAIH LGLQDVLYLG NLDSWRDWGH ARDYVKGMWA
MLQQPRPDDY VLATGVVHSV RAFVEMAFSK LGRRVTWQGE GVDEIGIDSA SGAKLVAIDP
RYFRPTEVEF LQGDPTKARE RLGWVAETPL AELVAEMVAA DLAVLKRTQE SLITND