Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0248 |
Symbol | |
ID | 3833919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 308360 |
End bp | 309376 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637824327 |
Product | inner-membrane translocator |
Protein accession | YP_425340 |
Protein GI | 83591588 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATCA CCCAGCCGGC CGCCAAGGCC CCGATCTCCT TGCGAAAGTA CGGAATCGTC TTCGCATTTC TCGGGCTCTG CGTGTTGGTC AGCGCGCTCT GCCAGCTCAA GGTGGTCCAG GGCGCCTGGC CCGAGAACAC CTTCCTGACC GTCAATAATC TGATGCTGAT CTTGCATCAG ATATCGGTGA ACGGCGTCCT TGCCGTCGGC ATGACCTTCG TCGTCATCTC GGCCGGCATC GATTTGTCGG TGGGCTCGGT CCTGGCCTTT TCCGGGATGA TGGCCGCCTC GATGGCCACC CGCTCGGTCG GGGTGACGCC ATGGAGCGAC ACCTATCCGG TGATCTTCCC GATCATCGCC GCCCTGGGCG TCGGCGCGCT GTGCGGCGGC TTAAGCGGCT GGATCATCGC CCGTTTCCGC ATCCAGGCCT TCATCGCCAC CCTGGGCATG CTGCTGGCGG CGCGCGGCTT CACCATGTCG GTCACCGGCG GCAATCCGAT TTCGGGCCTA AGCCCGGATT TCCGCTGGTT CGGCACGGGC AAGCTGTTCG AGGTGATCCC GGTGCCGGTG GTCATCCTCG CCCTGGTCTT CCTTCTGGCC TGGGTGATCC TCAATAAAAC GGTCTTTGGC CGCTACGTCT ATGCCGTTGG CGGCAACGAG AAGAGCGCGC GCACCTCGGG CATCAACACC GGGGCGATCC TCATCTGGGT CTATGTGGTC GCCGGCTTCC TGGCCGGCGT GGCCGGGGTG ATCCTGACCG CCAAGACCGG GTCGGCCCAG ACCAGCGCCG GCAGTTCCTA TGAACTTGAC GCCATCGCCG CCGTGGTCAT CGGCGGCGCC AGCCTGGCCG GCGGCGTCGG CCGGCTGACG GGTACGTTTT TCGGGGCCCT GATCATCGGC GTGATGAACA ACGGCCTCGA TATCCTGGGG GTCCAGAGCT TCTACCAGCT CATCATCAAA GGCGGACTGA TCGTTGTCGC CGTGATCCTC GACCCCTCAA GAAAACAGGC TGGTTGA
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Protein sequence | MHITQPAAKA PISLRKYGIV FAFLGLCVLV SALCQLKVVQ GAWPENTFLT VNNLMLILHQ ISVNGVLAVG MTFVVISAGI DLSVGSVLAF SGMMAASMAT RSVGVTPWSD TYPVIFPIIA ALGVGALCGG LSGWIIARFR IQAFIATLGM LLAARGFTMS VTGGNPISGL SPDFRWFGTG KLFEVIPVPV VILALVFLLA WVILNKTVFG RYVYAVGGNE KSARTSGINT GAILIWVYVV AGFLAGVAGV ILTAKTGSAQ TSAGSSYELD AIAAVVIGGA SLAGGVGRLT GTFFGALIIG VMNNGLDILG VQSFYQLIIK GGLIVVAVIL DPSRKQAG
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