Gene Rru_A0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0248 
Symbol 
ID3833919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp308360 
End bp309376 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content64% 
IMG OID637824327 
Productinner-membrane translocator 
Protein accessionYP_425340 
Protein GI83591588 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCA CCCAGCCGGC CGCCAAGGCC CCGATCTCCT TGCGAAAGTA CGGAATCGTC 
TTCGCATTTC TCGGGCTCTG CGTGTTGGTC AGCGCGCTCT GCCAGCTCAA GGTGGTCCAG
GGCGCCTGGC CCGAGAACAC CTTCCTGACC GTCAATAATC TGATGCTGAT CTTGCATCAG
ATATCGGTGA ACGGCGTCCT TGCCGTCGGC ATGACCTTCG TCGTCATCTC GGCCGGCATC
GATTTGTCGG TGGGCTCGGT CCTGGCCTTT TCCGGGATGA TGGCCGCCTC GATGGCCACC
CGCTCGGTCG GGGTGACGCC ATGGAGCGAC ACCTATCCGG TGATCTTCCC GATCATCGCC
GCCCTGGGCG TCGGCGCGCT GTGCGGCGGC TTAAGCGGCT GGATCATCGC CCGTTTCCGC
ATCCAGGCCT TCATCGCCAC CCTGGGCATG CTGCTGGCGG CGCGCGGCTT CACCATGTCG
GTCACCGGCG GCAATCCGAT TTCGGGCCTA AGCCCGGATT TCCGCTGGTT CGGCACGGGC
AAGCTGTTCG AGGTGATCCC GGTGCCGGTG GTCATCCTCG CCCTGGTCTT CCTTCTGGCC
TGGGTGATCC TCAATAAAAC GGTCTTTGGC CGCTACGTCT ATGCCGTTGG CGGCAACGAG
AAGAGCGCGC GCACCTCGGG CATCAACACC GGGGCGATCC TCATCTGGGT CTATGTGGTC
GCCGGCTTCC TGGCCGGCGT GGCCGGGGTG ATCCTGACCG CCAAGACCGG GTCGGCCCAG
ACCAGCGCCG GCAGTTCCTA TGAACTTGAC GCCATCGCCG CCGTGGTCAT CGGCGGCGCC
AGCCTGGCCG GCGGCGTCGG CCGGCTGACG GGTACGTTTT TCGGGGCCCT GATCATCGGC
GTGATGAACA ACGGCCTCGA TATCCTGGGG GTCCAGAGCT TCTACCAGCT CATCATCAAA
GGCGGACTGA TCGTTGTCGC CGTGATCCTC GACCCCTCAA GAAAACAGGC TGGTTGA
 
Protein sequence
MHITQPAAKA PISLRKYGIV FAFLGLCVLV SALCQLKVVQ GAWPENTFLT VNNLMLILHQ 
ISVNGVLAVG MTFVVISAGI DLSVGSVLAF SGMMAASMAT RSVGVTPWSD TYPVIFPIIA
ALGVGALCGG LSGWIIARFR IQAFIATLGM LLAARGFTMS VTGGNPISGL SPDFRWFGTG
KLFEVIPVPV VILALVFLLA WVILNKTVFG RYVYAVGGNE KSARTSGINT GAILIWVYVV
AGFLAGVAGV ILTAKTGSAQ TSAGSSYELD AIAAVVIGGA SLAGGVGRLT GTFFGALIIG
VMNNGLDILG VQSFYQLIIK GGLIVVAVIL DPSRKQAG