Gene Rru_A0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0222 
Symbol 
ID3834616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp273545 
End bp274552 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content63% 
IMG OID637824300 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_425314 
Protein GI83591562 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTC GTGTAGCGAT CAACGGTTTC GGCCGCATCG GCCGCCTCGT GCTGCGCGCC 
CTGGTTGAAT CGGGTCGCAA GGATGTGGAG GTGGTGGCGA TCAATGACCT GGGATCGCCG 
GAAGCCAATG CCCATCTGAT CAAGTTCGAT TCCGTCCACG GCGTGCTGCC CGGCGACGTG 
TCGGTCAGCG GCGACGTGAT GACCATCGCC GGCACCCCGG TGAAGGTTCT GGCCGAGCGC 
GATCCGACCA AGTTGCCCTG GGGCGACCTG AACATCGACA TCGTCATGGA ATGCACCGGC 
ATTTTCTCCG ACCGCGAGAA GGCCAAGGTG CATCTCGAAG CCGGCGCCAA GCGCGTTCTG 
GTTTCGGCGC CGTCGAACGG CGCCGATCTG ACCGTGGTTT ACGGTGTCAA TCACGACAAG 
CTGACCAAGG ACCATCTGGT CGTTTCCAAC GCGTCGTGCA CCACCAACTG TCTGGCCCCG 
GTGGCCCAGG TGCTTCATTC CGTGTTCGGC ATCGAGCACG GCTTCATGAC CACCATCCAC 
TCCTACACCG GCGACCAGCG CACCGTTGAC ACCCTGCACA AGGACCTGCA CCGGGCCCGC 
GCCGCCGCCG TGTCGATGAT CCCGACGACG ACCGGCGCCG CCAAGGCCGT TGGTCTGGTT 
CTGCCCGAAC TGGCCGGCAA GCTTGACGGC ACCTCGATCC GCGTGCCGAC CCCCAACGTC 
TCGGTCGTCG ATCTCAAGGT CGTGCTGTCC AAGACCGCCA CCGCCGAAGC CATCGGCGCG 
GCGATGAAGG AAGCCGCCGC CGGCAAGCTC AAGGGCGTTC TCGGTATCAA CGAGCTGCCG 
CTTGTCAGCA TCGACTTCAA TCACAACAAG AACAGCTCGA CCTTCGATCT GCCGCAGACC 
AAGGTCGTTC AGGGCACCTT CGCCCGCGTC CTGTCGTGGT ACGATAACGA ATGGGGCTTC 
TCCAACCGCA TGCTCGACAC CGCCGTCGAG ATGGGCAAGC TGATCTAA
 
Protein sequence
MAVRVAINGF GRIGRLVLRA LVESGRKDVE VVAINDLGSP EANAHLIKFD SVHGVLPGDV 
SVSGDVMTIA GTPVKVLAER DPTKLPWGDL NIDIVMECTG IFSDREKAKV HLEAGAKRVL 
VSAPSNGADL TVVYGVNHDK LTKDHLVVSN ASCTTNCLAP VAQVLHSVFG IEHGFMTTIH 
SYTGDQRTVD TLHKDLHRAR AAAVSMIPTT TGAAKAVGLV LPELAGKLDG TSIRVPTPNV 
SVVDLKVVLS KTATAEAIGA AMKEAAAGKL KGVLGINELP LVSIDFNHNK NSSTFDLPQT 
KVVQGTFARV LSWYDNEWGF SNRMLDTAVE MGKLI