Gene Rru_A0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0200 
Symbol 
ID3834312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp248466 
End bp249677 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content51% 
IMG OID637824278 
Productrestriction endonuclease 
Protein accessionYP_425292 
Protein GI83591540 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCTA ACGACGAGTT CAAGGAAAGT AAGGTGAAAG CCACGCCTTC TGATGCTGAG 
TTGGAAGCAG TGGTTATATC ACTGCAAAAT TCCATTCGAG AATGGGCGGC TAGGCACGAG
CTTTGGTTCG ACTGCGGCTT TCAGACTTAC GCCCAACGAG TGGATGGTGA ACCTGAAGCA
GCCCCTGTTG CAACTATTTT GCATTTCAAT GGAGATATTG GTCGTGCGCT AGATGGGGAA
TTTGGTGATC TCGATGTCGA GTTCATCGAG CTACTCGCGC GGCATGGTTT CTGGTTCGAT
CGGATCGATG AGGTGAGCGT TCATATCTAT CCTGAGGACG ATAGCCCTCT GTTCCAACCG
TTCCTCGACT ATGTCAACTG GCAATGGGTA TGCGGGCTGG TACAGCAGGA CATAGCCGAT
GTTCACGAGG AGCTGTATTC GCATTTCGCC AAGCGACCAG ACGATTTGCA TCGGCTCACA
TGGCGCGAGT TTGAAATTTT ACTATTCAGA ATATTTCAAA GCCAAGGCTT TACGTGTGAG
CTCGGCCCCG GCTCGAATGA TGGGGGAATT GATGTTCGCG TGCTTCAGCG CGATCCTCTC
GGGGACGTAC TGACGCTTGT TCAGGCAAAA AAATACTCAC CGAGAAACAA AATAGATATG
TCTGCTGTGG CAGCACTGCA TGGTGTGGCA GATGTCGAGA ATGCGCAAAA GAGCATTTTC
GTGACAACAT CCGATTACCT ACCCTCAGCA CGCAAGTTCG CTGGCCGAAC GCGCATTCCG
ATGACACTTG CTACGTCGAA CGACGTGCGG AACTGGTGTC AGAATGCAAG CGACGGGATT
ATTCGTGACA AATCAAAACT TGTCGCGCCA TCAGCAGTAT CGTACTTGCT TCAGAATCTT
TCGTCGAAAG ATTCCCGCAT AGTCTACGCT CGTACTGGCT ACTCGGTCAT CACGAACCAG
TTCGCGGTTG TGCTAAAGGA AACGAAGTAC GCAGCCCTGT TAATGGGGAT TCCTTCGCGA
ACGATCTCCG GTTACTGGCA GGAGGGTTTT GAAGTGCCTG ACATAGGCTC TAAATGCCTA
GAGGGCCTGA CAGCGGATAA CGTGTTCCGC GCGAAGCGGT CGGTGAGCGA CGGAAAGGTG
AGGTACTGGA ACGGGCATGA TTTATTCAGG GCTTGGAACG GCGAGCCCGT GCATTTCAAT
CTCTGTGATT AA
 
Protein sequence
MKPNDEFKES KVKATPSDAE LEAVVISLQN SIREWAARHE LWFDCGFQTY AQRVDGEPEA 
APVATILHFN GDIGRALDGE FGDLDVEFIE LLARHGFWFD RIDEVSVHIY PEDDSPLFQP
FLDYVNWQWV CGLVQQDIAD VHEELYSHFA KRPDDLHRLT WREFEILLFR IFQSQGFTCE
LGPGSNDGGI DVRVLQRDPL GDVLTLVQAK KYSPRNKIDM SAVAALHGVA DVENAQKSIF
VTTSDYLPSA RKFAGRTRIP MTLATSNDVR NWCQNASDGI IRDKSKLVAP SAVSYLLQNL
SSKDSRIVYA RTGYSVITNQ FAVVLKETKY AALLMGIPSR TISGYWQEGF EVPDIGSKCL
EGLTADNVFR AKRSVSDGKV RYWNGHDLFR AWNGEPVHFN LCD