| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0197 |
|---|
| Symbol | |
|---|
| ID | 3833888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 244729 |
|---|
| End bp | 246138 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637824275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_425289 |
|---|
| Protein GI | 83591537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCGA CCGGGGCGAC CTTTGACAGT CTTGTCGGCC AAATGGCCCA GAATCAAGAG
GTGCTTCAGG GCTGGGACGC GGTCGTCAAC GTGCTGCAAA GCGCGCTCGA CGCCTTTCTT
CTAAGCCATT GGCACCAGCA AACCGCCGGT CAGGGCCAGA TGACCATGGT CATGGTCTGG
TGCGAGGGCG TCTACAAAGC GCCGACGCCA GACCAGTATT ACACCACGGT CAGCCGCTTC
ACGGTGACCC TCGGCCCGCC GCTGTTCCAG TTCACTTCGG GGGCCGCCCA GGTCACCGTC
AGTCAGGCGG TCCTCGCCGG TTCCCTCGCG GTCGGTTCGA TGATCGTGCC GCAGAGCTTC
AAACCCGGCA CCTGCGATTG CCAGCCCGAT GATCCGCGTG TGGACTGGGG CCCGCCTGAA
CTCATCGATG TTGGTCAAAA GCCGGTGCTG ACCGGGACGG TTCCGGTGAG CGAGGTCACA
GGGGTTGTCA CCCCCGGCGC CCAATCGGTG GTGCTGGATT TCGCCATGGG CGCCTTCACC
TTCGGCAATA TGACCCTGTC TGGCCAACCG CCGGCCGTCA TTGCCGATCA GATCATGAAC
TGGTTCGCCG CCCATGAGGT GCGCTATTGC CTGTGTTCGG TCGACATGCG CGATTTCGGC
GCCGGACCGG GCCTGACTCC GCGGGCGTTC CGCTTCAACG TGGTGACGAC GCGCGGCGGC
AATACGCTGG TGCAGATCAT GATTTCGACG AGTGGCGCCA TCCCGCCGAC CCTGGGCGTT
CTGGTCGATG AACCCATTCC CACCGCCGAT GGCTATACTT GCAGCGTGAT GATCTCATCC
TACCGGCTGA TGAACGATAT TCTGGCCGGC GGCTTTCACA ATTCGGCCGG CTTCAGCCTG
TCCGCCTTCC GCGATGGCGG ATCCGGCGCG GCTTGGCAAA TGCGGCTTTA TCCCGCCATG
CACATCGCCG GCAGCTTTGA TTATGGCGAC TGCTGCAACC GGCATACGGA CACCTACAGC
ATTTACGTCA ATCTGATCTT TGGTGGATTT CCCGGCCCGG GTCTGCGGGT TTACGATCAC
ATTCAGACCG GGGGTAACCT GCCGGTGACG ATCGATGTCA ACGGCGTGTA TCCGATGGCG
CTTTCCGGCC AGGGCAGGGC GCAGGGGATC GCCATCACCC CGGGCAGCAT CAGCGTTTCA
GTCACCGGGG CCTGCGAGAA CGAGGTCAAG ACCCAGCTTT CCAGCATTTT GCAGGGCTCG
ATCCAGAACT CGCTGACAAG CGTGTCCTTC GCGCCGGTGA GCCTGCTGGC TTTTGAAAAC
CTGCTTTTTC CCGACCACCT CATCACCATT GGCCGGGTGG CCGCTCCGGC CGATCTGCTT
TTGGCCTGCA CCTTCCAGCC GCTCGGGTGA
|
|---|
| Protein sequence | MPSTGATFDS LVGQMAQNQE VLQGWDAVVN VLQSALDAFL LSHWHQQTAG QGQMTMVMVW
CEGVYKAPTP DQYYTTVSRF TVTLGPPLFQ FTSGAAQVTV SQAVLAGSLA VGSMIVPQSF
KPGTCDCQPD DPRVDWGPPE LIDVGQKPVL TGTVPVSEVT GVVTPGAQSV VLDFAMGAFT
FGNMTLSGQP PAVIADQIMN WFAAHEVRYC LCSVDMRDFG AGPGLTPRAF RFNVVTTRGG
NTLVQIMIST SGAIPPTLGV LVDEPIPTAD GYTCSVMISS YRLMNDILAG GFHNSAGFSL
SAFRDGGSGA AWQMRLYPAM HIAGSFDYGD CCNRHTDTYS IYVNLIFGGF PGPGLRVYDH
IQTGGNLPVT IDVNGVYPMA LSGQGRAQGI AITPGSISVS VTGACENEVK TQLSSILQGS
IQNSLTSVSF APVSLLAFEN LLFPDHLITI GRVAAPADLL LACTFQPLG
|
|---|
| |