| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0179 |
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| Symbol | |
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| ID | 3833870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 211593 |
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| End bp | 213335 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637824257 |
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| Product | CRISPR-associated Cas1/Cas4 family protein |
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| Protein accession | YP_425271 |
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| Protein GI | 83591519 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1468] RecB family exonuclease
[COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCCCT CCGACACACC GCCTTCCGCG GAAGATCTCC CCTCCCAGGG CGAATTGGCC
CTGTTCGCCC CACCGGCGAC CGCCGAGGAT GCCCTGGTGC CCGCCAGCAT GGTCAACGCC
TGGATCTATT GTCCCCGGCT GGCTGTTTTG GAATGGGGGC GTGGCGAAAA GGCCCGCAGT
GTGGATCTCA TCGCCGGCCT GCGCGCCCAT CAAGCCACGG AAAGCGGCCC GACTCCCGCC
CTCCCCGATC CCATGGTCCT GCGAGAAGAC CAAAGCCTGA AAACCCGCAG ATTATCGCTG
TCTTCGGAGC GCCTTGGGCT GACGGCCGAG CTTGATCTTC TCGATGTCGA AGAGGGGATG
GTGATCCCGG TCGAGATCAA GGTCGGCAAA CGCCCCTCCG TCGACGAGGG GGCTTATCTG
CCCGAACGCG CCCAGGTTTG CGCCCAGGCC CTTTTGCTCC GCGAGGCGGG CTACACCTGC
CTTGAAGGAG CGCTGTGGTT CGCCGAAAGC CGCGAGCGTG TAACGGTGGA TCTGACCGAG
GCGTTGGTCA CCGCCACCCT GGTCGCCACA TCGGATCTGC GCTTGACCGT GGCCAGCGGC
CGGCTGCCGC CGCCTTTGGA TCATTCGGCC AAATGCCCCC GCTGTTCGCT TTTGCCGATC
TGCCTGCCCG ATGAAATCGC TTGGTTCCGC AAGGGATCGA TCGCGCGAAC CCCTCCGCCC
CCGGCTTCTC CGGCCTTGCC ACTTTACGGA CAGACCCCCG GGGCCCGCAT CGGCAAGAAA
GACTATACGC TTGTCATCCA GGTCGAGGGC GAGGCCGACC GCAGCTTGGC GCTCGACGAG
ATATCGGAGG TGGTTCTGGC CGGCCCGGTG TCTCTGACCA CACCGGCCAT TCATGAATTG
CTGCGTCGCG AGATCCCCGT GGCCTGGATG TCCTCGGGCT TTTGGTTCCT GGGATCCACC
GGCGGCCAGG GCCCCAGAAG CGCCGCGGTT CGTACGGCCC AATACGCCCT TGCCGGTGAC
GAAAGGCGAC GCCAAGCCTT CGCCCGCGAT CTGGTTTCGG CGAAAATCCG CAATGGCCGG
ACCTTGTTGC GCCGCAACTG GCGGGGAGCG GAAGCCGAGC GCCAGATCGC GTTGGACCGC
TTGGCCCGCC TTGCCGAGCG GGCGACCACG GCCGAAACCA CCGCCTGTTT ATTGGGGATC
GAGGGGGAAG CCGCTGCGGT CTATTTCCGC GCCTTCCCAC AGCTTTTCAC CCAGGCCGTA
ACCACCCTTC CGGCCTTTGC CTTCGAGCGC CGCAACCGTC GCCCGCCGGC CGATCCGGTA
AACGCCTGCC TGTCGCTGTG CTACGCCGTG CTCACCCGCA CCTTATCGTC GGCGTTGAGC
ATCGCCGGCC TTGATCCGTG GAAGGGCTTC TATCACACCG AGCGCCCCGG TCGCCCGGCC
CTCGCCCTTG ATCTGATCGA ATCCTTTCGC CCCGTTCTGG CCGATTCCAC CGTCTTGATG
GTTTTAAACA ATGGCGAGAT CGGCACCAAT GATTTCCTGT ACGCTGGCGG CGGCTGCGCT
TTGAAGCCAA ACGCCCGACG CGGCCTGATC GCGGCCTATG AACGCCGATT GGACCAGGAA
ACCACCCACC CGGTCTTTGG GTATCAGCTT TCCATGCGGC GCCTGATTCA GGTGCAGGCC
CGCTTGCTCG CCCGCTTCGT CTCTGGCGAT ATTCCCCGCT ACCCTCATTA TTGTCCTCGT
TAG
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| Protein sequence | MAPSDTPPSA EDLPSQGELA LFAPPATAED ALVPASMVNA WIYCPRLAVL EWGRGEKARS
VDLIAGLRAH QATESGPTPA LPDPMVLRED QSLKTRRLSL SSERLGLTAE LDLLDVEEGM
VIPVEIKVGK RPSVDEGAYL PERAQVCAQA LLLREAGYTC LEGALWFAES RERVTVDLTE
ALVTATLVAT SDLRLTVASG RLPPPLDHSA KCPRCSLLPI CLPDEIAWFR KGSIARTPPP
PASPALPLYG QTPGARIGKK DYTLVIQVEG EADRSLALDE ISEVVLAGPV SLTTPAIHEL
LRREIPVAWM SSGFWFLGST GGQGPRSAAV RTAQYALAGD ERRRQAFARD LVSAKIRNGR
TLLRRNWRGA EAERQIALDR LARLAERATT AETTACLLGI EGEAAAVYFR AFPQLFTQAV
TTLPAFAFER RNRRPPADPV NACLSLCYAV LTRTLSSALS IAGLDPWKGF YHTERPGRPA
LALDLIESFR PVLADSTVLM VLNNGEIGTN DFLYAGGGCA LKPNARRGLI AAYERRLDQE
TTHPVFGYQL SMRRLIQVQA RLLARFVSGD IPRYPHYCPR
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