| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0175 |
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| Symbol | |
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| ID | 3834153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 206319 |
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| End bp | 209081 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824253 |
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| Product | CRISPR-associated helicase Cas3 family protein protein |
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| Protein accession | YP_425267 |
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| Protein GI | 83591515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAAAGC CCCTGGCGAC GCCCCTGGTC GCCACGGCCG TGAGCCCGCG CTGGCCCGAT
CCCTATCGGA AAACCGATCT GATGACCCTC CCGCGTTGGA TTTTAGGCTA TTGGGGAAAG
GCGCGCCCCG CCCGCGCCGA TGGCCCGGCG TGGCATCCCC TGGCCTATCA CGGCTTGGAT
GTCGCCGCGG CGATGGCCGC TCTTCTGGAT CTTCGGCCGG CGCTTCTCAA CGCCATCGCC
CGGGCGGCCG GCCTTTCGCC GCAAGACGCC CGGCGGGCGC TGATTCTGCT GGCCGCCTTT
CACGATCTGG GGAAATTCGC CGAGAATTTC CAACAGAAGG TCGAAATTCC CGGGATCATT
CCGGCGGCGC CGGGGGTCAT CGGGTCGAGC CAAAGGGGGC ATGGCGGCGT TGGGCTTCGG
TTGTGGGAAA CGGCCGTCCA AGCGGGGCCA GCGCCGCTAA GCGTCATCGC CGCTCGGCTT
GGCCAATGGA TCGACGCCGC CTTTGGTCAC CACGGCGCCC CGGTCGAGTC CAAGGGGTTT
CATCTGGCCG AGGCCCTGTC CCCCGCCGCC CGGGACGACG CCCTGGCCTT TGTGAACGAC
TGCCTGGGTT TCCTGCCGAT GCCCGAAGCC AGCGTCGATG GCGCCGATGA GATCTGGCAG
GTCGCCGGGC TGCTGATCCT GGCCGATTGG ATCGGTTCCA ACCAAACGTG GTTTCCCTAT
GCGCCGCCGG ACTCCTCGTT GGAGGCGTAC TGGCAAAAGG CGCAAGGGAA CGCCAAAGAC
GCCCTGGCCA AGGCCGCCCT GCGCGAGGCG CCGATCGCCC CCGGGCTTGA TCTATCCGAT
CTGATCGGCC CCCAGGCCCG GCCCTCGCCC CTGCAACGCT TCGCCGCGGC GGAAGCCCCG
CCCCGCGAGC CGACGCTTTA TATCATTGAA GACCTGACCG GATCGGGCAA GACCGAGGCC
GCCCTTCTGC TCGCCCATCG CCTGATGGCC GCCGGACAGG CCGAGGGGCT TTATTGGGCC
CTGCCCAGCA AGGCCACCGC CAATGCCCTT TACGCGCGGC TGGCCGCCGT TTATCGGCGC
CTGTTCCAGC CCGATACCGA TATTTCCCCG TGGATCGTGC TGGCCCATGG CGACCGCGAC
CTGAACCCGC TGTTTGCCGA CAGCCGGCGG CCCGGGGGCG AGTATTACGG CGAGACGCGC
TTGGCCGACG AGCAAAGCGC CGAGGCCCAA TGCGCCGCCT TCCTGGCCGA CGATATGAAG
AAGACGTTTC TCGGCCAAAT CGGCATCGGC ACCATCGATC AGGCGCTGCT CTCGGTGCTG
CCGGTGCGCC ATCAATCCCT GCGGATTTGC GCCCTGTCGC GGCGCGTTTT AGTTGTTGAC
GAGGCCCATG CCTATGATGA TTACGTGCAA GCCGAGTTGG CGCGTCTTTT GGAGTTCCAC
AGCGCCCTGG GCGGCAGCGC CATCGTGCTG TCGGCGACCC TGACCAAAAG CCAGCGCCGC
GACCTCTGCC GACGCTATCA ACGAACCCGG GGCGGCGATT TGCCCAACGC CGGGGCGGTG
AAACTGACCG AAGACGCCTT TCCCCTGGTG ACGCGGGTGA GCGCCCAAAG CCTTGTCGAA
ACCCCGCAAG ACGCGGCGCG CGGCACCCGC CGCGATCTGC CATTCCGCCT GTTCTCCACC
GTCGATCAGG CGCTGGAGTC GTTGATCGAC GCCGCCTCGG CCGGGCTCTG CGGCGTTTAC
ATCCGCAACA CGGTCACCGA CGCCATCGCC GCGGTTCAAA GGCTGCGCGC CCTGGCCCCG
CCGGGGGTCG ACGTGGCGCT GTTCCACGCC CGCTTCGCCC TGGGGGATCG GCTGGCCCAT
GAAAACAACG CCCTTGGGCG TTTCGGAAAA AACAGCACGC CCGACGACCG ACGCGGCCGG
ATTTTGGTGG CGACCCAGGT TGTCGAGCAA TCCTTGGATG TTGATTTCGA CGTTATGGTC
ACGGACCTCT GCCCGATGGA CCTGCTGATC CAGCGCGCCG GACGGCTGCA CCGCCATGCC
GACCGTCCCA GCCGCCCACC GCCGGTTCTG TCGGTGGTCG CCCCGCCGAC CGAGGGCGCC
ATCACCGCCC AATGGTACGC CGCGCTGTTT CCACAGGGGC AATTCGTTTA TCGCGATGTC
GGCCAACTGT GGCGAACCCT GAGCGTTCTG AAAGAGCGCG GCGGCCTGCC GCTTCTCAGC
GCCTCGCCGC GCCTTCTAAT CGAGGCGGTC TTTGGCGATT CCGCCGCTCC TTTGCCCCCC
ACCCTGGAAC AGCCCTCGTT CAAGGCCGAA GGCAAGCGTC AGGCAGAGCG GGCGGTTGGT
TACGTGGTCA GCCTGGAGCG CTCGGCGGGC TATTCCCAAC AGGTCGACGC CTGGAAGACC
GAGACCCAAG CCACCACCCG CCTGGGCGAC CAAGGCATTC GCCTGCGCCT TGCCCGTTGG
CAGAAGGGCC AGTTGCGGCC CTGGTTCGAT GATCCCGATC CGTGGCGGGC TTGGCGGCTT
TCCGAGGTCT CGGTACGCCG GGGCTTTGGC ACGCCGATCC CCCCCGATGC CCTGGCCGCC
AAGGCGATGG CGGCGCACCA AGCGCGGTGG CCCGATCGTA GCGACCCGCC TTTGCTGGTG
GCGCTGACCG CCACCGATGA TCCCGATCTT TGGGGCGCAA CCTGGAGCGA CGAGGACGAC
GCGGTTCGGC GCCTGCACTA CTCCGCCAGC GAGGGATTTC AGATCGACGA AATCCTGCCT
TGA
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| Protein sequence | MAKPLATPLV ATAVSPRWPD PYRKTDLMTL PRWILGYWGK ARPARADGPA WHPLAYHGLD
VAAAMAALLD LRPALLNAIA RAAGLSPQDA RRALILLAAF HDLGKFAENF QQKVEIPGII
PAAPGVIGSS QRGHGGVGLR LWETAVQAGP APLSVIAARL GQWIDAAFGH HGAPVESKGF
HLAEALSPAA RDDALAFVND CLGFLPMPEA SVDGADEIWQ VAGLLILADW IGSNQTWFPY
APPDSSLEAY WQKAQGNAKD ALAKAALREA PIAPGLDLSD LIGPQARPSP LQRFAAAEAP
PREPTLYIIE DLTGSGKTEA ALLLAHRLMA AGQAEGLYWA LPSKATANAL YARLAAVYRR
LFQPDTDISP WIVLAHGDRD LNPLFADSRR PGGEYYGETR LADEQSAEAQ CAAFLADDMK
KTFLGQIGIG TIDQALLSVL PVRHQSLRIC ALSRRVLVVD EAHAYDDYVQ AELARLLEFH
SALGGSAIVL SATLTKSQRR DLCRRYQRTR GGDLPNAGAV KLTEDAFPLV TRVSAQSLVE
TPQDAARGTR RDLPFRLFST VDQALESLID AASAGLCGVY IRNTVTDAIA AVQRLRALAP
PGVDVALFHA RFALGDRLAH ENNALGRFGK NSTPDDRRGR ILVATQVVEQ SLDVDFDVMV
TDLCPMDLLI QRAGRLHRHA DRPSRPPPVL SVVAPPTEGA ITAQWYAALF PQGQFVYRDV
GQLWRTLSVL KERGGLPLLS ASPRLLIEAV FGDSAAPLPP TLEQPSFKAE GKRQAERAVG
YVVSLERSAG YSQQVDAWKT ETQATTRLGD QGIRLRLARW QKGQLRPWFD DPDPWRAWRL
SEVSVRRGFG TPIPPDALAA KAMAAHQARW PDRSDPPLLV ALTATDDPDL WGATWSDEDD
AVRRLHYSAS EGFQIDEILP
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