Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0170 |
Symbol | |
ID | 3834148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 201233 |
End bp | 201895 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637824248 |
Product | CRISPR-associated Cse3 family protein |
Protein accession | YP_425262 |
Protein GI | 83591510 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.396726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATA TCACCCGCGC CGAGTTATCC CGCGACACCG GCGCCCGCAA AGCCCTGACC GCCTTGCTCC GCGATCAGGG CGGCACCGAT GGCGGACACC GGCTGGTGTG GACCTTGTTC GCCGATGATC CCAAGGCTTC GCGCGATTTT GTCTTCCGCG AAGCCGAGCC GGGGCGCTAT CTGATCGTTT CGGCCCGTCC GCCCGGCGAT GGGCAAGGGC TGTGGCGGCT GGAAACCAAG CCCTATGCTC CGGCCTTTCG TGAAGGCCAG CGCTTTGGGT TCACCCTGCG CGCCAATCCG GCGACCGCCG TCAAACAAGC CGGAGAGACG CGTGGCAAGC GGGTTGACGC GATCATGCAC GCCAAAACCC GCTCCGCCAC CCCGCTGACG GTCGAGGATC GGGAACGCGT CGCGCTGGAT TGGCTGCTCG ATCGCCAGCA GGGCTTTGGG GTGCTCTTCG AGCGCGCCTT GTGTTCGGCC GGCGGCTATC GCCAAGTTCG CGTTCCCCGT GGCGGCAAGG CCATCACTTT TTCGGTGATC GATTACGAGG GCGTGTTCAC CGTTCGCGAT CCCGGCCTTT TGGGGCAAGC CCTGGTACGG GGGATCGGCA AGGCCAAAGC CTATGGCTGC GGCTTGATGC TGCTGCGGCG GCTGGCGGAA TAA
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Protein sequence | MSHITRAELS RDTGARKALT ALLRDQGGTD GGHRLVWTLF ADDPKASRDF VFREAEPGRY LIVSARPPGD GQGLWRLETK PYAPAFREGQ RFGFTLRANP ATAVKQAGET RGKRVDAIMH AKTRSATPLT VEDRERVALD WLLDRQQGFG VLFERALCSA GGYRQVRVPR GGKAITFSVI DYEGVFTVRD PGLLGQALVR GIGKAKAYGC GLMLLRRLAE
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