Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0162 |
Symbol | groEL |
ID | 3833692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 187808 |
End bp | 189439 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637824234 |
Product | chaperonin GroEL |
Protein accession | YP_425254 |
Protein GI | 83591502 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.762857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCCA AAGACGTCAA GTTTTCCAGC GACGCCCGTG ATCGCCTGCT GCGCGGCGTC GACACCCTGG CCAATGCGGT CAAGGTGACG CTCGGCCCCA AGGGCCGCAA CGTGGTGATC GACAAAAGCT TCGGCGCCCC GCGCATCACC AAGGACGGCG TGTCCGTCGC CAAGGAAATC GAACTGAAGG ACAAGTTCGA GAACATGGGC GCGCAGATGC TGCGCGAGGT CGCCTCCAAA TCCGCCGATG TCGCCGGCGA TGGCACGACC ACCGCCACCG TGCTGGCCCA GGCCATCGTC CGCGAGGGCA GCAAGGCGGT CGCCGCCGGC ATGAACCCGA TGGACCTCAA GCGCGGCATC GATCTGGCGG TCGCCGCCGT CGTCAAGGAC GTGAAGACGC GCTCGCGCAA GATCGCCACC AATGATGAAA TTGCCCAGGT CGGCACCATC TCGGCCAATG GCGATGAAGA GGTCGGCAAG ATCATCGCCC GGGCGATGGA CAAGGTCGGT CACGAGGGCG TGATCACCGT CGAGGAGGCC AAGGGCCTCG ATACCGAGCT CGACGTGGTC GAAGGCATGC AGTTCGATCG CGGCTATCTG TCGCCCTATT TCGTGACCAA CGCCGAGAAG ATGGTCGCCG ATCTGGAAAA CCCCTACATC CTGATCCACG AAAAGAAGCT CTCGGGCCTG CAGCCGCTGC TGCCGGTGCT CGAAGCCGTC GTCCAGTCGG GGCGGCCGCT GCTGATCATC GCCGAAGATG TCGAGGGCGA GGCCCTGGCC ACCCTGGTGG TCAACCGTCT GCGCGGCGGC CTCAAGGTCG CCTCGGTCAA GGCCCCGGGC TTTGGCGATC GCCGCAAGGC GATGCTCGAA GACATCGCCA TCCTGACCGG TGGGCAGGTG ATCAGCGAAG ACCTGGGCAT CAAGCTTGAG ACCGTCACCC TCGACATGCT GGGCACGGCC AAGACGGTGA CGATCACCAA GGACAACACC ACCATCGTCG ACGGCGCCGG CGTCAAGGCC GATATCGACG CCCGCTGCGC CCAGATCCGC GCCACCATCG AAGACACCAC TAGCGATTAC GACCGGGAAA AGCTGCAAGA ACGTCTGGCC AAGTTGTCGG GCGGCGTCGC GGTGATCCGG GTTGGCGGTG CCAGCGAAGT CGAGGTCAAG GAGAAGAAGG ACCGCGTCGA CGACGCGATG CACGCCACCC GCGCCGCCGT TGAGGAAGGC ATCATCGCCG GCGGCGGTGT CGCCCTGCTG CATGCGGCCA AGGCCCTGGA CGCCCTGAGC CCGGCCAACG CCGATCAGAA GGTCGGGATC GAGATCGTGC GGCGCGCCCT GCAGGCGCCG GTGCGCCAGA TCGCCGAGAA CGCCGGCGTC GATGGCGCCG TGGTCGCCGG CAAGCTGCTT GAAAGCTCCG ATGCCGATTT CGGCTACAAC GCCCAGACCG GGGTCTATGA GAATCTGGTC AAGGTCGGGG TGATCGATCC GACCAAGGTC GTGCGCACCG CCCTCCAGGG GGCGGCCTCG GTGGCCTCGC TGCTGATCAC CACCGAGGCG ATGGTCGCCG AAATCCCCGA GAAGAAGCCG GCCCTGCCCG CCGGCGGCGG CATGGGCGAC ATGGACTTCT AA
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Protein sequence | MAAKDVKFSS DARDRLLRGV DTLANAVKVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI ELKDKFENMG AQMLREVASK SADVAGDGTT TATVLAQAIV REGSKAVAAG MNPMDLKRGI DLAVAAVVKD VKTRSRKIAT NDEIAQVGTI SANGDEEVGK IIARAMDKVG HEGVITVEEA KGLDTELDVV EGMQFDRGYL SPYFVTNAEK MVADLENPYI LIHEKKLSGL QPLLPVLEAV VQSGRPLLII AEDVEGEALA TLVVNRLRGG LKVASVKAPG FGDRRKAMLE DIAILTGGQV ISEDLGIKLE TVTLDMLGTA KTVTITKDNT TIVDGAGVKA DIDARCAQIR ATIEDTTSDY DREKLQERLA KLSGGVAVIR VGGASEVEVK EKKDRVDDAM HATRAAVEEG IIAGGGVALL HAAKALDALS PANADQKVGI EIVRRALQAP VRQIAENAGV DGAVVAGKLL ESSDADFGYN AQTGVYENLV KVGVIDPTKV VRTALQGAAS VASLLITTEA MVAEIPEKKP ALPAGGGMGD MDF
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