Gene Rru_A0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0162 
SymbolgroEL 
ID3833692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp187808 
End bp189439 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content66% 
IMG OID637824234 
Productchaperonin GroEL 
Protein accessionYP_425254 
Protein GI83591502 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.762857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCCA AAGACGTCAA GTTTTCCAGC GACGCCCGTG ATCGCCTGCT GCGCGGCGTC 
GACACCCTGG CCAATGCGGT CAAGGTGACG CTCGGCCCCA AGGGCCGCAA CGTGGTGATC
GACAAAAGCT TCGGCGCCCC GCGCATCACC AAGGACGGCG TGTCCGTCGC CAAGGAAATC
GAACTGAAGG ACAAGTTCGA GAACATGGGC GCGCAGATGC TGCGCGAGGT CGCCTCCAAA
TCCGCCGATG TCGCCGGCGA TGGCACGACC ACCGCCACCG TGCTGGCCCA GGCCATCGTC
CGCGAGGGCA GCAAGGCGGT CGCCGCCGGC ATGAACCCGA TGGACCTCAA GCGCGGCATC
GATCTGGCGG TCGCCGCCGT CGTCAAGGAC GTGAAGACGC GCTCGCGCAA GATCGCCACC
AATGATGAAA TTGCCCAGGT CGGCACCATC TCGGCCAATG GCGATGAAGA GGTCGGCAAG
ATCATCGCCC GGGCGATGGA CAAGGTCGGT CACGAGGGCG TGATCACCGT CGAGGAGGCC
AAGGGCCTCG ATACCGAGCT CGACGTGGTC GAAGGCATGC AGTTCGATCG CGGCTATCTG
TCGCCCTATT TCGTGACCAA CGCCGAGAAG ATGGTCGCCG ATCTGGAAAA CCCCTACATC
CTGATCCACG AAAAGAAGCT CTCGGGCCTG CAGCCGCTGC TGCCGGTGCT CGAAGCCGTC
GTCCAGTCGG GGCGGCCGCT GCTGATCATC GCCGAAGATG TCGAGGGCGA GGCCCTGGCC
ACCCTGGTGG TCAACCGTCT GCGCGGCGGC CTCAAGGTCG CCTCGGTCAA GGCCCCGGGC
TTTGGCGATC GCCGCAAGGC GATGCTCGAA GACATCGCCA TCCTGACCGG TGGGCAGGTG
ATCAGCGAAG ACCTGGGCAT CAAGCTTGAG ACCGTCACCC TCGACATGCT GGGCACGGCC
AAGACGGTGA CGATCACCAA GGACAACACC ACCATCGTCG ACGGCGCCGG CGTCAAGGCC
GATATCGACG CCCGCTGCGC CCAGATCCGC GCCACCATCG AAGACACCAC TAGCGATTAC
GACCGGGAAA AGCTGCAAGA ACGTCTGGCC AAGTTGTCGG GCGGCGTCGC GGTGATCCGG
GTTGGCGGTG CCAGCGAAGT CGAGGTCAAG GAGAAGAAGG ACCGCGTCGA CGACGCGATG
CACGCCACCC GCGCCGCCGT TGAGGAAGGC ATCATCGCCG GCGGCGGTGT CGCCCTGCTG
CATGCGGCCA AGGCCCTGGA CGCCCTGAGC CCGGCCAACG CCGATCAGAA GGTCGGGATC
GAGATCGTGC GGCGCGCCCT GCAGGCGCCG GTGCGCCAGA TCGCCGAGAA CGCCGGCGTC
GATGGCGCCG TGGTCGCCGG CAAGCTGCTT GAAAGCTCCG ATGCCGATTT CGGCTACAAC
GCCCAGACCG GGGTCTATGA GAATCTGGTC AAGGTCGGGG TGATCGATCC GACCAAGGTC
GTGCGCACCG CCCTCCAGGG GGCGGCCTCG GTGGCCTCGC TGCTGATCAC CACCGAGGCG
ATGGTCGCCG AAATCCCCGA GAAGAAGCCG GCCCTGCCCG CCGGCGGCGG CATGGGCGAC
ATGGACTTCT AA
 
Protein sequence
MAAKDVKFSS DARDRLLRGV DTLANAVKVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI 
ELKDKFENMG AQMLREVASK SADVAGDGTT TATVLAQAIV REGSKAVAAG MNPMDLKRGI
DLAVAAVVKD VKTRSRKIAT NDEIAQVGTI SANGDEEVGK IIARAMDKVG HEGVITVEEA
KGLDTELDVV EGMQFDRGYL SPYFVTNAEK MVADLENPYI LIHEKKLSGL QPLLPVLEAV
VQSGRPLLII AEDVEGEALA TLVVNRLRGG LKVASVKAPG FGDRRKAMLE DIAILTGGQV
ISEDLGIKLE TVTLDMLGTA KTVTITKDNT TIVDGAGVKA DIDARCAQIR ATIEDTTSDY
DREKLQERLA KLSGGVAVIR VGGASEVEVK EKKDRVDDAM HATRAAVEEG IIAGGGVALL
HAAKALDALS PANADQKVGI EIVRRALQAP VRQIAENAGV DGAVVAGKLL ESSDADFGYN
AQTGVYENLV KVGVIDPTKV VRTALQGAAS VASLLITTEA MVAEIPEKKP ALPAGGGMGD
MDF