| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0148 |
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| Symbol | |
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| ID | 3834556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 171839 |
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| End bp | 173680 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637824220 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_425240 |
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| Protein GI | 83591488 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.592571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC TTCGCAACAT CGCCATCATC GCCCACGTCG ACCACGGCAA GACCACGCTC
GTCGACGCCC TGCTCAAGCA GAGCGGCAGC TTCCGGGAAA ACCAGAAAGT GGACGAGCGC
GCGCTCGATT CCAACGATCT GGAAAGGGAA CGCGGCATCA CCATCCTGGC CAAATGCACC
TCGGTCGACT GGAAGGGCGT TCGCGTCAAT ATCGTCGACA CCCCGGGACA CGCCGATTTC
GGCGGTGAGG TCGAGCGCAT CTTGTCGATG GTCGACGGTG TCGTCCTGCT TGTCGATGCC
GCCGAAGGCC CGCTGCCCCA GACCAAATTC GTGCTCGGCA AGGCCCTGGC CCTTGGCCTG
CGCCCGATCG TCGTCATCAA CAAGGTCGAT CGCCCCGACG CCCGCGCCCA TGAGGTCCAC
GACGAGGTTT TCGATCTGTT CGCCAACCTC GGCGCCTCGG ACAAGCAGCT TGATTTCCCC
TGCCTGTTCG CCTCGGGCCG CAACGGCTGG GCGGTGAACA CGCTTGAAGA GATCGACGGC
GGCACCGAAG GCCTGACCCT CGAGCCGCTG TTCAAGTTGG TGGTCGACCA TGTGCCCGCC
CCCGAGCGCG TGCTTGACGC CCCCTTCGCC ATGCTGGCGA CCACCCTTGA ATACGACCCG
TACCTGGGTC GCGTGCTGAC CGGCCGCATC CTGTCGGGTC GGGCCAAGAT CAACATGCCG
ATCAAGGCGC TGGCCCGCGA TGGCCGCATC CTTGAACAGG GCCGCGCCTC CAAGCTGCTG
GCCTTTCGCG GCCTGAACCG CGTTCCGGTC GAAGAGGCCG AGGCCGGCGA TATCATCGCC
ATCGCCGGTA TCGCCAAGGC CACCGTGGCC GATACGCTCT GCGCCCTGGA ACTCGATCAG
CCGATCTATG CGGCGCCGAT CGACCCGCCG ACCCTGGCCA TGACCTTCTC GGTCAACGAC
TCGCCCTTGG CCGGCCTGGA AGGCGACAAG CTGACCAGCC GCGTCATCGC CGCCCGTCTG
GCCCGCGAAG CCGAGGGCAA TGTCGCCATT CACATCCGCG AAACCGAAGA CAAGGACGCC
TTCGAGGTCG CCGGCCGTGG CGAACTGCAG CTTGGCGTGC TGATCGAAAC CATGCGCCGC
GAAGGCTTCG AGCTGTCGAT TTCGCGCCCG CGCGTGCTCT ATAAGACCGA CGAGCAGGGC
GGCAATCGCG AAGAGCCGAT CGAAGAGGTG GTGATCGACG TCGACGAGGA ATTCTCCGGC
ACGGTCGTTG ACAAGATGTC CCAGCGCAAG GCCGAGCTTC AGGAAATGAA GCCCTCGGGC
GGCGGCAAGC TGCGCTTGGT CTTCCACGCC CCGTCGCGCG GACTGATCGG CTATCACGGC
GAATTCCTGA CAGACACCCG GGGCACCGGC ATCATGAACC GCCTGTTCCA CGGTTATGCC
CCGTTCAAGG GCACGATCGA CGGCCGGCGC GAGGGCGTGC TGATCTCCAA TGGCGCCGGC
GATGCCGTGG CCTATGCCAT CTTCAATCTT CAGGACCGTG GCCCGATGTT CATCGAGCCG
GGCGTGAAGG TCTACGAGGG CATGATCGTT GGCGAGCACA ACCGCGGCAA CGACCTGGAA
ATCAACGTCC TCAAGGGCAA GCAGCTGACC AACATCCGCG CTTCGGGCAA GGACGAGGCC
ATTCGCCTGA CCCCGCCCTT GCGCAAAAGC CTGGAAGAGG CCCTGGCCTA TATCCAGGAC
GACGAGTTGG TCGAGGTGAC CCCGAAGACC ATCCGTCTGC GCAAGCGTTG GCTTGATTCC
AACGAGCGCA AGAAGCGTTC GAAGAAGGTC TCCGAGGCCT GA
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| Protein sequence | MTTLRNIAII AHVDHGKTTL VDALLKQSGS FRENQKVDER ALDSNDLERE RGITILAKCT
SVDWKGVRVN IVDTPGHADF GGEVERILSM VDGVVLLVDA AEGPLPQTKF VLGKALALGL
RPIVVINKVD RPDARAHEVH DEVFDLFANL GASDKQLDFP CLFASGRNGW AVNTLEEIDG
GTEGLTLEPL FKLVVDHVPA PERVLDAPFA MLATTLEYDP YLGRVLTGRI LSGRAKINMP
IKALARDGRI LEQGRASKLL AFRGLNRVPV EEAEAGDIIA IAGIAKATVA DTLCALELDQ
PIYAAPIDPP TLAMTFSVND SPLAGLEGDK LTSRVIAARL AREAEGNVAI HIRETEDKDA
FEVAGRGELQ LGVLIETMRR EGFELSISRP RVLYKTDEQG GNREEPIEEV VIDVDEEFSG
TVVDKMSQRK AELQEMKPSG GGKLRLVFHA PSRGLIGYHG EFLTDTRGTG IMNRLFHGYA
PFKGTIDGRR EGVLISNGAG DAVAYAIFNL QDRGPMFIEP GVKVYEGMIV GEHNRGNDLE
INVLKGKQLT NIRASGKDEA IRLTPPLRKS LEEALAYIQD DELVEVTPKT IRLRKRWLDS
NERKKRSKKV SEA
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