| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0132 |
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| Symbol | |
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| ID | 3834540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 154209 |
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| End bp | 155795 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637824204 |
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| Product | peptidase S13, D-Ala-D-Ala carboxypeptidase C |
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| Protein accession | YP_425224 |
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| Protein GI | 83591472 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTT GGGCCCGGCG AGGCTTTGGC TTCGGCCTGA TGGTTTTTGT CACCCTGCTG
GCGGCGGCGA TCGCCCAGCC GGCCGCGGCG CGCGAGGCCA CCAAGAAAGC GGCGGCGGCG
GCCGGCCCGG CGAAGACGGC GACGACCGCC GAACTGATCG CCCATTACGG CTTCGCCCCC
CATCAAATCG GCTTCGCCGT GCGCGATCTG CAAACCGGCC GCTGGCTGAG CGCCCATAAC
GCCCAGGAGC CGTTCCTGCC GGCCTCGGTC TCGAAAGTGC CGACGACCGT CGCCGCCCTC
GAGCTTCTCG GCCCCTCCTA CCGCTGGGAA ACCCGGCTGG TCTCCACCGG CAGCGTCGTT
GACGGCGTGC TCAAGGGCGA CCTTTATCTG GTGGGCGGGG GCGATCCGGT GCTCGATGGC
CGGCGGTTGA GCGCCCTGGT CGATAGCCTG GGCACGGCGG GCATCCGCGC GGTCGACGGG
CGGTTCCTCT ATGATGACAC CCTGATCGCC AGCGCCCCCG AGATCGAACC CAGCCAGCCC
GCCGATCTGG CCTACAACCC GGGCTTCGGC GCCTTGGCCC TGGATTTCAA CCGGGTGATG
CTGACCTGGG ATCCCAAGGG CGGCCCGCGC ATGGGCGAAG TCTTCGATGT GCCGCCGGTC
GACAGCGTGC GCTTTCGCGT CTCCGGCCCC CAGGACCCGC CCTGGAGCAC CAAGGCCGGC
GCCCTGCGCT ATGAGGACAC CCCGCCCCCC GTTGTCACCG CCGGTCTGGC GCCGATGGCC
CATCCCCCCC AGACGCCGGG GGAATCCTGG GTGCTGGCCC CGACCTGGAA GGGATCGGGC
TCCACGTGGC TGCCGGTCAA GCATCCGGGC GCCCATGTCG CCCAGGTCGC CCGCGCCCTT
GCCCAACGCG ACGGCGTGAC CCTGCCGCCG CCCCAACCCG GGGCCGCCCC GCCGCGCGCC
CGGGTGATCG GCTTAAGCGA AAGCCCGCCG CTGTTCGAAG TGGCGACGGC GGCGCTCAAA
CATTCCAACA ATCTGGTCGC CGAGATGATC GGCATGACCG CCACCCGGCG GATCACCGGC
CGGGCGCTGG CGCCTACCGA AAGCGCCGAA ACCCTGGCGG CGCTGTTTCG CGCCACCCTG
CCCGGCCTCG ATTGGTCGAC TTTCCGTCTG GCCAATCATT CAGGCCTGAC CATGGACAGC
CGAATGACCC CCGAACAGAT GACGGCGATC CTTGATTACG CCCAGCTTCA CGCCTTCAGC
GGCCTGGATT ACGCCGGATT GCTGCCAACG CGGCGCTGGG GCCTGGAAGA TGACAGCGAT
CTGCCCGAAA CCCGCGACGG CCGCCTGCCG GTCTGGGCCA AGACGGGAAC CGTGTATTAC
GGGCGGGGGC TGGCCGGTTA TATCGTGCCG CGCTCGGGAC ACTTGCTCGC CTTCTCGTTC
TTCGCCAACG ACCTCGACAA GCGCCGCACC TTCGACGAGG CCAATCTTCA CCACGACGGG
CGGGCGATCG CCGCCGCCCG CGGCTGGCTG GGCCGCGCCC GGGCGTTGGA GCGCGATCTG
GTGGAACGCT GGCTGGCGAC CTATTGA
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| Protein sequence | MAFWARRGFG FGLMVFVTLL AAAIAQPAAA REATKKAAAA AGPAKTATTA ELIAHYGFAP
HQIGFAVRDL QTGRWLSAHN AQEPFLPASV SKVPTTVAAL ELLGPSYRWE TRLVSTGSVV
DGVLKGDLYL VGGGDPVLDG RRLSALVDSL GTAGIRAVDG RFLYDDTLIA SAPEIEPSQP
ADLAYNPGFG ALALDFNRVM LTWDPKGGPR MGEVFDVPPV DSVRFRVSGP QDPPWSTKAG
ALRYEDTPPP VVTAGLAPMA HPPQTPGESW VLAPTWKGSG STWLPVKHPG AHVAQVARAL
AQRDGVTLPP PQPGAAPPRA RVIGLSESPP LFEVATAALK HSNNLVAEMI GMTATRRITG
RALAPTESAE TLAALFRATL PGLDWSTFRL ANHSGLTMDS RMTPEQMTAI LDYAQLHAFS
GLDYAGLLPT RRWGLEDDSD LPETRDGRLP VWAKTGTVYY GRGLAGYIVP RSGHLLAFSF
FANDLDKRRT FDEANLHHDG RAIAAARGWL GRARALERDL VERWLATY
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