| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0123 |
|---|
| Symbol | |
|---|
| ID | 3834184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 142472 |
|---|
| End bp | 143962 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637824194 |
|---|
| Product | D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase |
|---|
| Protein accession | YP_425215 |
|---|
| Protein GI | 83591463 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.187793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCCA CCCCCGCCCT TGCCGAAATC GTCGCCTCCC TCGCCCGGGT CCGGGTGCTG
TGCGTCGGCG ACGTCATGCT CGACCGTTTC GTGCGGGGCG ATGTGGAACG AATCTCGCCC
GAGGCTCCGA TCCCGATCGT CCGGGTGCGC GACGAGCGCG CCATGCTGGG CGGGGCGGGC
AATGTCGTGC GCAATATCGT GGCTTTGGGC GGACGCTGCG CCTTCATGGC GGTGATCGGC
GAGGATCGGG CCGGCGCCGA AATCGGCGGC CTGCTCGGCG ACGAACACAA GGTCGACAGC
TTCATCGGTA TCCAGCCCAA CCGCCGGACC AGCGTCAAGA CCCGCTTCTT CGCCGGCAGT
CAGCAATTGT TGCGCGCCGA CGATGAAACC ATCGCCCCGC TCGATCCCTA TGACGCCGAC
CGCCTGCTTG GCGATGTGCG CAGCCAGATC ACCACCGTTG GCGCCCTGGT ACTGTCGGAT
TACGGCAAGG GCGTTCTTGA CGGACCGGTG GCCGCCAGCC TGATCGCCAT GGGCCGCACG
CAAAATCTGC CGGTGATCGT CGATCCCAAG GGCCGCGATT TCACCCGCTA TCGCGGCGCC
ACCGTTTTGA CCCCCAATCG CAAGGAACTA GCCGAAGCCA CCGGCCTGCC CACGGGCACC
GACGACGAAG TGGTGACGGC CTGCCGCCAG GTGATCGCCC GGTGCGGCGT CGATACCGTG
CTCGCCACCC GCAGCCAGGA CGGCATGACC CTGGTCGGCG CCGATGGCTC GGTGCTCCAC
CTGCCGGCCG AAGCCCGCGA GGTCTATGAC GTCTCGGGCG CCGGTGACAC TGTGGTCGCC
ACCCTGGCCG CCGCCCTGGC CGGCGGGGCG CCGCTGGCCG TCGCCTGCCG GCTGGCCAAT
CTGGCCGCCG GCATCGTCGT CGGCCGGGTC GGCACCGCCG CCGTTCCCGC CGCCGATCTG
ATGGCCGCCG TCCACCAGGA AGAGGTCAGC GCCCGCGATT CGAAAATCGT CGGCGCCGAG
GATGCCCGCG AGGTGGTCGA TAAATGGCGC CGCCACGGGC TGCGCATCGG CTTCACCAAC
GGCTGCTTCG ATCTGCTCCA CCCCGGCCAC GTCTCCTTGC TGCGTCAGGC GCGCGCCGCC
TGCGACCGGC TGGTGGTCGG CCTTAACAGC GACGCCTCGG TCCGCCGGCT GAAGGGCGAC
AGCCGGCCGG TGCAAGACGA AACGGCGCGG GCGATCGTGC TGGCCTCGCT GGCCGATGTC
GATCTGGTGG CGGTCTTCGG CGAAGACACC CCCCTTGGCC TGATCACCAC CTTGCTGCCC
GATGTTCTGG TGAAGGGCGC CGATTATACC GTGGATACGG TCGTCGGCTC CGACGTTGTG
CTGACCAATG GCGGGCGGGT TCTGCTCGCC GATCTCAAGG CGGGCTTTTC CACCACCTCC
ACCATCGCCC GCCTCCATGG CGGATCGCGC CGATCGGGAG ATACCCTTTG A
|
|---|
| Protein sequence | MDPTPALAEI VASLARVRVL CVGDVMLDRF VRGDVERISP EAPIPIVRVR DERAMLGGAG
NVVRNIVALG GRCAFMAVIG EDRAGAEIGG LLGDEHKVDS FIGIQPNRRT SVKTRFFAGS
QQLLRADDET IAPLDPYDAD RLLGDVRSQI TTVGALVLSD YGKGVLDGPV AASLIAMGRT
QNLPVIVDPK GRDFTRYRGA TVLTPNRKEL AEATGLPTGT DDEVVTACRQ VIARCGVDTV
LATRSQDGMT LVGADGSVLH LPAEAREVYD VSGAGDTVVA TLAAALAGGA PLAVACRLAN
LAAGIVVGRV GTAAVPAADL MAAVHQEEVS ARDSKIVGAE DAREVVDKWR RHGLRIGFTN
GCFDLLHPGH VSLLRQARAA CDRLVVGLNS DASVRRLKGD SRPVQDETAR AIVLASLADV
DLVAVFGEDT PLGLITTLLP DVLVKGADYT VDTVVGSDVV LTNGGRVLLA DLKAGFSTTS
TIARLHGGSR RSGDTL
|
|---|
| |