Gene Rru_A0099 details

Gene Information

• Locus tag: Rru_A0099
• ID: 3833853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 113029
• End bp: 115020
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637824169
• Product: Serine phosphatase
• Protein accession: YP_425191
• Protein GI: 83591439
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2208] Serine phosphatase RsbU, regulator of sigma subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCTGA CCCGCGCTCT GCGCAAGATG CCCTTGGGGC GGCGTCTCAT GCTGACCATG 
GCCATCTATG CCCTGGCCGT TCTGGTGATC GTCGTTTCGG GATGGCGGCT GGTCACGCTG 
GTGGAAGACT ACCGCAGCAC CACCGAGGTT CTCGACCTGC GCATGCGCGA AATCACCGCG 
GTGCGCGATA CCTCCTCGCG CTTTCTGACG GTGATCACCG CCTATGCCGA TACCCGCGAT 
CCGGCGATCG GCGATGACGT GGCCTTCAAA TATGGCCAGA TCGGCCGTGC CGCCGAGGCG 
GTATCGCTCA AGGAGGACGA TATCGAGGCC GTCCTCGGCG GGCTCGAGAC CGTGCTCAAA 
GACTCCATGG GGAATTTCGA GGACCTGCGC GCGCTCAACC AGCGGGCCGG GCAGACCTAT 
CATCACCTTG GCCGGCTGGC CGGCGAGGTC TCGGGCCTGA TGGCCTTCGC CCAAAGCCGC 
ATGGCGCAAG CCGGCGGATC GCCCGACCCC TTGATCGCCC GCTTCGATCA GGTCACCGCG 
CTGATCGACG AATTCCACAT ATTCCAGCGG CGCGCCACCG GCAAAGAAGC CGAAAGCACC 
CTGGCCGCCT TCCGCGACGC GCTCGAAAGC GCCAGCCGGT CGCGCCCGAC CGAGGCCGAA 
CGTCTGGCCT TGAGCCTCGC CGATGATCGC CTGGGGCAGA TCAGCCACGA GTTAACCACC 
CTGCTGCGCC TGTCGGACTC CTGGGTCGGC CAATCGCGCT TCCTGGTCTT CGTCAACCTT 
GAGAAAGTCA CTGCCGCCAT CGATGCCCTC GACACCCTGG GCAAGGTCCG GGAGCATCAA 
CTGCGCGCCG ATCTTCAAGA CAAGACGCGC GCCACCTTGA TCTTCGTCGG CTCGCTGGCC 
GGGGTGGTAC TGGTGCTTGG CTTCCTGGCC AACGCCCTAG TGATTCAAAG CATCCGCCGG 
CCGATCCTGG CGCTGAACGA GGTGATGCAG AACCTTGCCG GCGGCACCCT CGACCGCGCC 
GTCGAAGGCC AGGAGGCCGC CGACGAGATC GGGGCGATGG CCCGCACCCT GGAGATCTTC 
AAGCTCAATA CCCGGCGAAT GAACGAGCTG GAGGTTGAAA AGCGCGAAAT CCTGCGCCGG 
GAAAACGAGG AAATCGCCCA GTCGCTGGCC CAGCTTGACG AGGCGCACCG GGAAATCAGC 
GCGCTCAACA CCCGCTTGAA CTCGGAAAAC CTGCGCCTGG GCGCCGAACT GGACGTGTCG 
CGCCGCATTC AGCAGATGCT TTTGCCGCGC GACGAGGAAT TGAGCGAGAT CACCGCGCTC 
GATATCGCCG CCTTCATGGA ATCGGCCGAC GAGGTCGGCG GCGACTACTA CGACATCATG 
AAACACGAGG GCGGCGTGCG CATCGGCATC GGCGATGTCA CCGGCCATGG CCTGGAAAGC 
GGCGTCGTCA TGCTGCTCAC CCAATCGGCG GTGCGCACCC TGACCACCGA TGGCCGCGGC 
GACCGCGCCA GCTTGGTCGA TGTGCTGAAC CGCTCGCTGG CGGGCAATAT GCGGCGCATG 
GGCAGCGGCA AGAACCTGAC CTTCGCCCTG ATCGACTACC AGCCCCGGCC CGAGGGCGGC 
GGCGCCATGC GGGTGATCGG CCAGCACGAA AGCCTGATCG TCATCCGCAC CGATGGCCGG 
GTCGAGGAAC TCGACACCCT GATGCTCGGC ATGCCGCTTG GGTTGGTCGA CGATATGCGC 
ACCTATCTCG ACGAAGCCGC CCTCAGCCTG GAGCCGGGCG ATATGGTGGT GCTCTATACC 
GACGGCATCA CCGAAGCCGC CGATACCGGC GATCGCCTGT ACGGCATGGA CCGCCTGAAG 
GCCACCTGCC TTGCCCATCG CACCGAAACC AGCGGCGCCA TCAAAGACGC GGTGATCGCC 
GATGTCCGCG CCCATATCGG CGAGCGGGCG GTGCTCGACG ACCTGACCCT GATCGTCATC 
AAGCAACGCT GA 

 

Protein sequence

MILTRALRKM PLGRRLMLTM AIYALAVLVI VVSGWRLVTL VEDYRSTTEV LDLRMREITA 
VRDTSSRFLT VITAYADTRD PAIGDDVAFK YGQIGRAAEA VSLKEDDIEA VLGGLETVLK 
DSMGNFEDLR ALNQRAGQTY HHLGRLAGEV SGLMAFAQSR MAQAGGSPDP LIARFDQVTA 
LIDEFHIFQR RATGKEAEST LAAFRDALES ASRSRPTEAE RLALSLADDR LGQISHELTT 
LLRLSDSWVG QSRFLVFVNL EKVTAAIDAL DTLGKVREHQ LRADLQDKTR ATLIFVGSLA 
GVVLVLGFLA NALVIQSIRR PILALNEVMQ NLAGGTLDRA VEGQEAADEI GAMARTLEIF 
KLNTRRMNEL EVEKREILRR ENEEIAQSLA QLDEAHREIS ALNTRLNSEN LRLGAELDVS 
RRIQQMLLPR DEELSEITAL DIAAFMESAD EVGGDYYDIM KHEGGVRIGI GDVTGHGLES 
GVVMLLTQSA VRTLTTDGRG DRASLVDVLN RSLAGNMRRM GSGKNLTFAL IDYQPRPEGG 
GAMRVIGQHE SLIVIRTDGR VEELDTLMLG MPLGLVDDMR TYLDEAALSL EPGDMVVLYT 
DGITEAADTG DRLYGMDRLK ATCLAHRTET SGAIKDAVIA DVRAHIGERA VLDDLTLIVI 
KQR