Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0085 |
Symbol | |
ID | 3834278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 98274 |
End bp | 99635 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637824155 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_425177 |
Protein GI | 83591425 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGC TGACCGGCAG CGATGCCGAC ATCGAAATCG AAGAGGCGCC GCCGGGAAAG ATCCTGATCG TCGAGGATTC GCCCTTCTTT ATGCATGTCC TGCGCCGGCG GATCGGTCAG GAACTGGGCG TTCCGATCAT CGAGGCCGAA ACCCTGGCCC AGGCCGCCCT GATCATCGAA GAGGAAGGGT CCAATCTATT CCTCTGCCTG ATCGATCTGG TGCTGCCCGA TGCGCCGAAC GGCGAGATCG TCGATTATGT GACCGGGAAA GGTCTGGCCG CGGTGGTGTT CACCGGCGCC TTCAGCGAGG AAATGCGCGA GCATGTCCTG TCTAGCGCCA TTATCGATTA TGTTACCAAG GATAGTCTGG CCAGCCTGGA CTATCTGGTG GCGATCGTCC GCCGGCTTTG CCGCAACGCC CACCAGAAAG CCATCGTCGT CGATGACAGC CGTACCGCCC GGGCTTATAT CGGCGATCTG CTCCGCCTGT ATCGTTTCAA TGTCATCGAG GCGGTCGACG GCGAGGAGGC CCTGGCCCTG CTGGCGGCGA ACCCCGATAT CCGGCTGATG GTCACCGATT ATTACATGCC CAGAATCGAT GGCTTCGAAT TGATCAAACG CGTGCGCCAA ACCCATTCGC GCAGCGCTCT GGCGATCATC GGCGTGTCCA CCGGGGGAAG CGCGCCGCTT TCGGCGCGGT TCATCAAGTA CGGGGCCAAT GATTTCATCA ACAAGCCCTT TCTGCGCGAG GAATTCTTCT GCCGCATCGC CCAGAACATG GACACCTTGG ATTATATCGC CGCCCTGGCC CGCTCGGCCC AGATCGATCC GCTGACCGGA CTGCCCAACC GCCGCTATCT GTTCGATGTC GCCAGCCGCG CCCTGGCCGC GACCTTGCGC GTCGGCGGTC ATCCGGTGGT GGCGATGATC GATGCCGATC ATTTCAAGGA AATAAACGAT CGTTTCGGCC ATGATGTCGG CGATCAGGTG CTTGAAGCCC TGGCTCGGGT GATGGACGAT CATGTCCAGC GGAAGTCCGA TGTCCTTGCC CGTTTCGGCG GCGAGGAGTT TTGCGTGTTC GTCTCCGACA TGTCGCCCGA ACAGGCCTTC ACCTTTTTCG ATGGCTTGCG CGCTGCTGTC GCCCAATCGC CGCTGTCGGT TCCCGGACTG GATGATTTGT CGCTGACCAT CAGCATCGGC GTTTCCACCT GCGCCGCCCC CGACTTGCGT ACGATGATCC ACAGCGCCGA CCGTTTGCTC TATGACGCCA AGGCGGCGGG GCGTGATTGC ACGGTGGTCG AGGGCTTGGG CGAGCGGACG CAATCGTGCC GGCAAAGTAG CGGGAAGGAC GAAGACGCGT GA
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Protein sequence | MDLLTGSDAD IEIEEAPPGK ILIVEDSPFF MHVLRRRIGQ ELGVPIIEAE TLAQAALIIE EEGSNLFLCL IDLVLPDAPN GEIVDYVTGK GLAAVVFTGA FSEEMREHVL SSAIIDYVTK DSLASLDYLV AIVRRLCRNA HQKAIVVDDS RTARAYIGDL LRLYRFNVIE AVDGEEALAL LAANPDIRLM VTDYYMPRID GFELIKRVRQ THSRSALAII GVSTGGSAPL SARFIKYGAN DFINKPFLRE EFFCRIAQNM DTLDYIAALA RSAQIDPLTG LPNRRYLFDV ASRALAATLR VGGHPVVAMI DADHFKEIND RFGHDVGDQV LEALARVMDD HVQRKSDVLA RFGGEEFCVF VSDMSPEQAF TFFDGLRAAV AQSPLSVPGL DDLSLTISIG VSTCAAPDLR TMIHSADRLL YDAKAAGRDC TVVEGLGERT QSCRQSSGKD EDA
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