Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0055 |
Symbol | |
ID | 3834385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 60139 |
End bp | 61011 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637824125 |
Product | VacJ-like lipoprotein |
Protein accession | YP_425147 |
Protein GI | 83591395 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.743056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGGCG TGACAGTGCT TGCCCTGATG TCCCTGACCG CCTGCGCCGG CGTTGACGAG TCATCCTCCG CCAATGCCGC CTCGGTCGAC AAAGGGGCCG TGCAGTTCGC CGCCGCCGAA CCGACCACCG ACGCCCAATT CGCCCCCTCG TCCCAGCTTG CCCAGGCCCA GCCGGCGCAG CAGGGCAAGA CCCAGATCAA CGCGGGGCAG GAAGGCGCCG TCAGCGATCC TCTCGAACCG TGGAATCGCT ACGTCTTTTC CGTCAATGAC GTTGTCTATA CCTTCGCCCG TCCGTGGATC GCGCCCTATA TGGTGCTGCC GCAGGAAGGC AAGGATACCG TCGACAACTT CCTTCACAAC CTCACCTCGC CGGTGATCCT GGTCAACGAC CTGCTTCAGG GCGAATTCGA CCGGGCCTGG ACCACCACCA AGCGCTTCGC CATCAATTCC ACCACGGGCG TCCTCGGCTT GATCGATGTC GCCGAAGACT ATGGCATGGC CAAGCACGAC GAGGATTTCG GCCAGACCCT GGGCACCTAC GGCGTCGGCG ACAGCCCCTA TCTCGTCCTG CCGCTGCTGG GCCCGTCCAA CCCGCGCGAC GGCATCGGCC GGGGCGTCGA TACGGTCACC GATCCGCTAT TCTGGGTCGG CACCACGGCG ATCAGCGCCG GCCGCATGTA TGGTACCTTC TCCAATGAAT ACGGCGGTCA TGTGAACGAG ATGGACTCGT TGCGCGAGAC CTCTCTCGAC TATTACGCCA CGATGCGCAG CCTCTACACC CAGATGCGCC GGGCGAAGGT CAAAAACATC GAGACCCCCG ACTCGGAAGA AGCCAATATC GATTACTTCT CCCACGTCGA CGATCCCCAG TAA
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Protein sequence | MGGVTVLALM SLTACAGVDE SSSANAASVD KGAVQFAAAE PTTDAQFAPS SQLAQAQPAQ QGKTQINAGQ EGAVSDPLEP WNRYVFSVND VVYTFARPWI APYMVLPQEG KDTVDNFLHN LTSPVILVND LLQGEFDRAW TTTKRFAINS TTGVLGLIDV AEDYGMAKHD EDFGQTLGTY GVGDSPYLVL PLLGPSNPRD GIGRGVDTVT DPLFWVGTTA ISAGRMYGTF SNEYGGHVNE MDSLRETSLD YYATMRSLYT QMRRAKVKNI ETPDSEEANI DYFSHVDDPQ
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