Gene Rru_A0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0055 
Symbol 
ID3834385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp60139 
End bp61011 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content63% 
IMG OID637824125 
ProductVacJ-like lipoprotein 
Protein accessionYP_425147 
Protein GI83591395 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.743056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGGCG TGACAGTGCT TGCCCTGATG TCCCTGACCG CCTGCGCCGG CGTTGACGAG 
TCATCCTCCG CCAATGCCGC CTCGGTCGAC AAAGGGGCCG TGCAGTTCGC CGCCGCCGAA
CCGACCACCG ACGCCCAATT CGCCCCCTCG TCCCAGCTTG CCCAGGCCCA GCCGGCGCAG
CAGGGCAAGA CCCAGATCAA CGCGGGGCAG GAAGGCGCCG TCAGCGATCC TCTCGAACCG
TGGAATCGCT ACGTCTTTTC CGTCAATGAC GTTGTCTATA CCTTCGCCCG TCCGTGGATC
GCGCCCTATA TGGTGCTGCC GCAGGAAGGC AAGGATACCG TCGACAACTT CCTTCACAAC
CTCACCTCGC CGGTGATCCT GGTCAACGAC CTGCTTCAGG GCGAATTCGA CCGGGCCTGG
ACCACCACCA AGCGCTTCGC CATCAATTCC ACCACGGGCG TCCTCGGCTT GATCGATGTC
GCCGAAGACT ATGGCATGGC CAAGCACGAC GAGGATTTCG GCCAGACCCT GGGCACCTAC
GGCGTCGGCG ACAGCCCCTA TCTCGTCCTG CCGCTGCTGG GCCCGTCCAA CCCGCGCGAC
GGCATCGGCC GGGGCGTCGA TACGGTCACC GATCCGCTAT TCTGGGTCGG CACCACGGCG
ATCAGCGCCG GCCGCATGTA TGGTACCTTC TCCAATGAAT ACGGCGGTCA TGTGAACGAG
ATGGACTCGT TGCGCGAGAC CTCTCTCGAC TATTACGCCA CGATGCGCAG CCTCTACACC
CAGATGCGCC GGGCGAAGGT CAAAAACATC GAGACCCCCG ACTCGGAAGA AGCCAATATC
GATTACTTCT CCCACGTCGA CGATCCCCAG TAA
 
Protein sequence
MGGVTVLALM SLTACAGVDE SSSANAASVD KGAVQFAAAE PTTDAQFAPS SQLAQAQPAQ 
QGKTQINAGQ EGAVSDPLEP WNRYVFSVND VVYTFARPWI APYMVLPQEG KDTVDNFLHN
LTSPVILVND LLQGEFDRAW TTTKRFAINS TTGVLGLIDV AEDYGMAKHD EDFGQTLGTY
GVGDSPYLVL PLLGPSNPRD GIGRGVDTVT DPLFWVGTTA ISAGRMYGTF SNEYGGHVNE
MDSLRETSLD YYATMRSLYT QMRRAKVKNI ETPDSEEANI DYFSHVDDPQ