Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0039 |
Symbol | |
ID | 3834369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 42142 |
End bp | 42810 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637824109 |
Product | cytochrome c-type biogenesis protein CcmB |
Protein accession | YP_425131 |
Protein GI | 83591379 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.46619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAG TCTTTTTGTC GGTTCTGACC CGCGAACTGC GTCTGGCCCT GCGCCAGGGC GGCGACAGCC TGATGGTGGT GGCCTTTTTC GTCGTCACCG TGGTGCTGTT TCCCTTTGGC GTCGGCCCCG AACCGGCGGT GCTTGAACGC ATCAGCGCCG GGGTGCTGTG GGTCACCGCC CTGCTCGCCT CGATGCTGTC GCTCGACCGC CTGTTCCAGC AGGATTACGA GGATGGCAGC CTTGACCTGC TGGTGCGCTC CTCGGCGCCG TTGAGCGCCG TCGTCATCGC CAAGGTCGCC GCCCATTGGC TGACCTCGGC CCTGCCGCTG ATCGCCGCGG CGCCCCTGCT CGCCGTCTTG CTGCAGATGC GCGGCGATGG CTTCGCCGTG CTGATGGCGG CGATGGCGCT CGGCACCCCC AGCCTCAGCC TGATCGGCGC CGTGGGGGCC GCCCTGGTGC TCGGCGCCCG GCGCGGCGGG GTTCTGGTGT CGTTGCTGAT CCTGCCGCTG TCGGTGCCGA TTCTGATCTT CGGCGTTTCG GCCGTCGACG CGGCGGTGAT GGGATTATCC TATGCCGCCC AACTCAAGGT CCTGGCGGCG ATTTTGCTTG TCACCCTGGC GCTTTGCCCC TTCGCCACGG CGCTCGCCTT GCGTCAGGCG GTGGAATGA
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Protein sequence | MSGVFLSVLT RELRLALRQG GDSLMVVAFF VVTVVLFPFG VGPEPAVLER ISAGVLWVTA LLASMLSLDR LFQQDYEDGS LDLLVRSSAP LSAVVIAKVA AHWLTSALPL IAAAPLLAVL LQMRGDGFAV LMAAMALGTP SLSLIGAVGA ALVLGARRGG VLVSLLILPL SVPILIFGVS AVDAAVMGLS YAAQLKVLAA ILLVTLALCP FATALALRQA VE
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