| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0024 |
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| Symbol | |
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| ID | 3834125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 28454 |
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| End bp | 29599 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824094 |
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| Product | peptidase |
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| Protein accession | YP_425116 |
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| Protein GI | 83591364 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.02023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGAA GGCGGTGCGG TGTCTGGTCC ATGCTTGGCG GTGCGGCCCT GGTTTTATCG
ACGATCGGTC CGGCCGGCGC CCTGCCGCCC GCGCCAGCCG CCGCCGGGGC CGGTCTGGGG
CCGTCTTTGG CGCTCACCCC CGTGTTCATG GTTGGCGAGG AGGGCGTGCT CACCCTGGCG
CCGACGCTTG AGATCGTCAC TCCGGCGGTG GTCAATATCG CGGTGAAGGC CACGGTGGCG
GCGCGGCCCA ATCCCTTGCT GTCCGATCCG CTGTTTCGCC AGTTCTTCGG CGTGCCGCCC
GGGGCCGAAG GCCCGCGCGA GCGCACGGTG GTATCGGCCG GGTCGGGGGT GATCGTCGAT
GCGGTGCGCG GCACCATCTT GACCAACCAC CATGTCGTCG ACGGCGCCGA GGATATCACC
GTCACCCTCA AGGATCGCCG GGTGCTCAAG GCGACGCTGC TGGGCAGCGA TCCCGGCACC
GACATCGCCG TGCTCCGCGT CAAGGCCGAT CGTCTGACCG CCTTGCATCT GGCCGATTCG
GATCGGGCCC AGGTTGGCGA TCTGACCATC GCCATCGGCA ATCCCTTCGG TCTGGGCCAA
ACGGTGACCA CCGGGGTGAT CAGCGCCAAG GGGCGCAGCG GCGTTATCCC CGACGGCTAC
GAGGATTTCC TGCAGACCGA CGCGTCGATC AACCCGGGCA ATTCCGGGGG CGCCCTGGTC
AATTCCCGGG GCGATCTGGT TGGCATCAAT ACCGCGATCT TGTCGTCGGG CGGCGGCAGC
GTCGGCATCG GCTTTGCCAT TCCCAGCAAT ATCGCCCGCG CGGTGATGGA ACAGATCCTC
AAGGACGGAA CGGTTCGGCG CGGTCATCTT GGCGTGTCGA TCCAGACCGT CAGTCCGGCC
GTGGCCGAAA GCCTGGGCCT GCCCCGGGCG GCCGGGGTTA TCATCGCCGC GGTCGAGCGG
GGATCGACCG CCGAAAAAGT CGGGCTGCGC ACCGGCGATG TGATCTTGGC GGTCGACGGC
AGGCCTTCGG AAACCGCCGA GGTGCTGCGC CGCCAGATTG GCCTTGCCCA GATCGGCGAC
CGGGTGAGGC TGACGGTGAT GCGCGAGGGC AAATCCTTCG ATCTTCAGGC CCGCATCGGC
TCATGA
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| Protein sequence | MTRRRCGVWS MLGGAALVLS TIGPAGALPP APAAAGAGLG PSLALTPVFM VGEEGVLTLA
PTLEIVTPAV VNIAVKATVA ARPNPLLSDP LFRQFFGVPP GAEGPRERTV VSAGSGVIVD
AVRGTILTNH HVVDGAEDIT VTLKDRRVLK ATLLGSDPGT DIAVLRVKAD RLTALHLADS
DRAQVGDLTI AIGNPFGLGQ TVTTGVISAK GRSGVIPDGY EDFLQTDASI NPGNSGGALV
NSRGDLVGIN TAILSSGGGS VGIGFAIPSN IARAVMEQIL KDGTVRRGHL GVSIQTVSPA
VAESLGLPRA AGVIIAAVER GSTAEKVGLR TGDVILAVDG RPSETAEVLR RQIGLAQIGD
RVRLTVMREG KSFDLQARIG S
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