Gene Rru_A0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0009 
Symbol 
ID3833896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp9673 
End bp10137 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID637824078 
ProductPTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_425101 
Protein GI83591349 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.963845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTA CCGACCTCAT TACGCCTGAC AGCATCATCG CCAATCTGCG CGTGTCCAGC 
AAAAAGCAGG CCCTGCAGGA ACTGGCGAAG CGTGCTGCCG AGCTTACCGG ACAGCACGAG 
CGCGCTATTT TCGACGTGCT GCTGGAACGG GAAAGGCTGG GAACCACGGG CGTGGGCAAT 
GGCATCGCCA TACCCCATGG CAAATTGGCC AGTCTTTCGG GGTTACACGG CCTGTTCGCC 
CGTCTCGAGG AGCCGATCGA CTTCGATTCC ATCGATGATC AGCCCGTGGA TCTGGTGTTC 
TTGCTGCTCG CCCCGGAAGC GGCGGGGGCT GATCACCTGA AGGCCTTGGC CCGGGTTTCC 
CGGTTGCTGC GCGACCGTTC GATTTGCGAG AAGCTGCGCG GCACCAGCGA CCCGGAGGCG 
CTCTATACGC TTCTGGCCCA TTCCCAGGCC TCCCAGGCGG CCTGA
 
Protein sequence
MEITDLITPD SIIANLRVSS KKQALQELAK RAAELTGQHE RAIFDVLLER ERLGTTGVGN 
GIAIPHGKLA SLSGLHGLFA RLEEPIDFDS IDDQPVDLVF LLLAPEAAGA DHLKALARVS 
RLLRDRSICE KLRGTSDPEA LYTLLAHSQA SQAA