Gene Rru_B0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_B0046 
Symbol 
ID3833377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007641 
Strand
Start bp48155 
End bp49639 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content59% 
IMG OID637824065 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_425082 
Protein GI83582776 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTC AGTCCGCCAG CGCGCCGATA ACCCCGGTGA TCTTGTCGGG GGGCTCGGGC 
AGTCGCCTAT GGCCCTTGTC GCGTGCCCTC TACCCCAAAC AGTTCCTACC CCTGGTCAGC
GAACTGACGA TGATCCAGGA GACCGCCCTT CGGGCCTCTG GCGAGCGGTT TACCGCCCCT
CTGGTCATTT GCAACGATGA GCATCGCTTC ATCGTGGCCG AACAATTGCG GGCCGCGGCC
TGTCAGCCTA CGGCGATCAT TCTCGAACCC GTCGGCCGCA ACACCGCTCC GGCAGTGGCG
GTGGCGGCGC TCAAACTTTT GGAAAGCGCC AGCGATCCCA TCATGTTGGT GATGCCTTCC
GATCATGTCA TCCAGAACGC CGACGCTTTC CTCGCCGCCA TTGATCAAGC GGCGCCGGCG
GCGCGCGCCG GAGCCTTGGT GACCTTCGGG ATCACTCCCA ACGCCCCGGA AACCGGCTAT
GGCTATATCA AAGCCGGCGG ATCTTTCGCC CCTTTCACCG GCGTGCTCAG GGTCGAGCGG
TTCGTCGAGA AGCCCAATCT GCAGACGGCG GAAAGCTATC TGGCCGAAGG GTCCTATCTC
TGGAACAGCG GCATCTTTCT GTTTTCCGCC AAGGCCTATC TCGCCGAATT GGGGCGCACG
AACTCCAAAA TTATCGAAGC CTGCAGCCAA GCTCTTGCCC AGGGTCAGCG GGATTTGAGC
TTTTGCCGGC TTGATGCGGC GGCCTTCGCC GCTTCTCCAG CGGATTCCAT CGATTATGCC
GTCATGGAAA AAACGGCCAA TGCCGCCGTC TTTCCCGTCG AGATGGGGTG GAGTGATCTG
GGAGCCTGGT CGGCCTTGTG GGAAATCGGC CCCAAGGACG CGCAGGACAA CGTGGCTCTT
GGCGACGTTC TGCTCCAGGA CGTCGAAGGG TCCTATATTC GCTCCGATCA CCGTCTCGTG
GCCGTGGCGG GGTTGTGCAA TGTCGTGGTG GTCGCGACGG ACGATGCGGT CCTGGTGATT
GATCGCGGCA AGGTCCAGGA CGTCAAACAG ATCGTCGAAC GCCTTAAAAA AGCGAACCGG
GACGAGCACG CGCTGCACAG TACCGTCCAT CGTCCTTGGG GACATTATCG CGGCATCGAT
CGCGGTGAGC GCTTTCAGGT GAAACGCATC GTCGTCCAAC CCGGTGAGCG GCTCTCGTTG
CAGATGCACC ATCACCGGGC CGAACATTGG ATCGTCGTCA CTGGAACCGC CCTTGTAACC
CGTGGGGCGG AAACCTTCCT GCTTCACGAA AATGAATCCA CCTATATTCG GGCTGGCCAA
ACCCATCGTT TGGAAAATCC GGGCAAGGTC CCCTTGCATT TGATCGAGGT GCAGTCGGGT
GGATATCTGG GAGAAGACGA TATCGTTCGC TTCGAAGATG GTTATGGGAG AACTCTCCCA
CAGAAAGAGC CGCCTCTTAT TTCTCTAGAA AATAAAACAG AATAA
 
Protein sequence
MASQSASAPI TPVILSGGSG SRLWPLSRAL YPKQFLPLVS ELTMIQETAL RASGERFTAP 
LVICNDEHRF IVAEQLRAAA CQPTAIILEP VGRNTAPAVA VAALKLLESA SDPIMLVMPS
DHVIQNADAF LAAIDQAAPA ARAGALVTFG ITPNAPETGY GYIKAGGSFA PFTGVLRVER
FVEKPNLQTA ESYLAEGSYL WNSGIFLFSA KAYLAELGRT NSKIIEACSQ ALAQGQRDLS
FCRLDAAAFA ASPADSIDYA VMEKTANAAV FPVEMGWSDL GAWSALWEIG PKDAQDNVAL
GDVLLQDVEG SYIRSDHRLV AVAGLCNVVV VATDDAVLVI DRGKVQDVKQ IVERLKKANR
DEHALHSTVH RPWGHYRGID RGERFQVKRI VVQPGERLSL QMHHHRAEHW IVVTGTALVT
RGAETFLLHE NESTYIRAGQ THRLENPGKV PLHLIEVQSG GYLGEDDIVR FEDGYGRTLP
QKEPPLISLE NKTE