Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_B0028 |
Symbol | |
ID | 3833359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007641 |
Strand | + |
Start bp | 26248 |
End bp | 27666 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637824047 |
Product | ABC transporter related |
Protein accession | YP_425064 |
Protein GI | 83582758 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCTG ACCCCACTTC CGGAGCCGCG ATCACCGTTG AGGGCTTAAA GAAGGTCTTC CGTATTTACG AGCGTCCCCG TGACCGCATC CTGCAGCTCA TCCTGCCCGG TAAGCGCAAG TTTTATCGCG AGTTCCAGGC GCTCGACGAT GTCTCTTTCA CGGTCCAAAA AGGTCAGGCC GTTGGCATCA TCGGTCGCAA CGGATCGGGG AAATCAACCC TGCTGCAGAT GATCTGCGGC ATCCTTCATC CCACGGCAGG CAAGGTCTCC TGTTCGGGCC GAGTGGCTGC TTTGCTTGAA CTGGGAGCAG GGTTCAATCC GGATTTCACC GGCCGTGAAA ACGTCTATAT GAACGCCACG CTGCTGGGTC TGACCACGGC GGCGGTCGAT GAGCGCATGG ATGATATTCT GGCCTTTGCC GAGATCGGCG ATTTCATCGA TCACCCGGTG AAGACCTATT CAAGCGGCAT GTTCGTCCGT TTGGCCTTTG CGGTGATGGC TCATGTCGAT GCGGAGATTC TGATCATCGA CGAGGCCCTG GCCGTGGGAG ACGCCGCCTT TGGGCAAAAG TGCATGCGCT TCCTCCGCCG CTTTCGCGAG ACGGGAACCA TTCTCTTCGT CAGCCATGAC ACGGCGGCCG TGATCGGGCT CTGCGACCGG GCTGTTTGGC TTGATCGCGG CAAGATGATC ATCGAAGGCG ATGCCAAAAC CGTTTGCGAG GCCTATTACG GTCATCTTTT CGGGGGAACG GTGGAGACGC CCCCCGAGAA AACCGTGGAG GCGATTACGC CATCTCCCGC CCCCGAAGGA CCGCGGCCTA AGGTCCGGGC CGAGGATTGG GTGGATGGTC GGCGCGAATG GATCAACCAC TCTTCGCTGC GCAATGACAT CGAGGTTTTC ACCTTCGATC CCTCGGGCAC CGATTTCGGC GCCGGTGGCG CGGAGATCGA GGATGTCCGC CTGACCGATG ACGATGGCCA CCCCTATGCC TGGATCGTCG GGGGCGAGCC AACGCGTTTG CGGGTGACGG TCCGTGTTCG CGATGAGTTG CGCAGTCCGA TCATCGGCTT TTTCGTGAAG GACCGTCTGG GCCAAACGCT GTTTGGCGAT AACACCTTCA TGAACGAGAA GAAATTATCG AAACCGGCGC TGCCTGGTCA AATCCTGGAA GCAAACTTCC GCTTTCCCAT GCCGATCCTA CCCCCTGGAA CCTATTCGAT CGCCGTTGCC GTCGCCGATG GCACCCAGAC CGATCACGTC CAGCATCATT GGCTTCATGA CGCGGTGATG GTCAAATCCC ACGTCTCGCA TGCGACGGCG GGGCTGGTCG GCATTCCCAT GTTCGAGGTT CGGTTTGAAT GCCACGACCC GGTTGCTTCC CCGTCTTCGT CCATGGACAA GGTCGGGATC GTCGACTGA
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Protein sequence | MSSDPTSGAA ITVEGLKKVF RIYERPRDRI LQLILPGKRK FYREFQALDD VSFTVQKGQA VGIIGRNGSG KSTLLQMICG ILHPTAGKVS CSGRVAALLE LGAGFNPDFT GRENVYMNAT LLGLTTAAVD ERMDDILAFA EIGDFIDHPV KTYSSGMFVR LAFAVMAHVD AEILIIDEAL AVGDAAFGQK CMRFLRRFRE TGTILFVSHD TAAVIGLCDR AVWLDRGKMI IEGDAKTVCE AYYGHLFGGT VETPPEKTVE AITPSPAPEG PRPKVRAEDW VDGRREWINH SSLRNDIEVF TFDPSGTDFG AGGAEIEDVR LTDDDGHPYA WIVGGEPTRL RVTVRVRDEL RSPIIGFFVK DRLGQTLFGD NTFMNEKKLS KPALPGQILE ANFRFPMPIL PPGTYSIAVA VADGTQTDHV QHHWLHDAVM VKSHVSHATA GLVGIPMFEV RFECHDPVAS PSSSMDKVGI VD
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