Gene Rru_B0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_B0018 
Symbol 
ID3833349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007641 
Strand+ 
Start bp17434 
End bp18111 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID637824037 
Producthypothetical protein 
Protein accessionYP_425054 
Protein GI83582748 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCCT CACCTCTTCC CTCCCAGGCC GCCGGCCTGC CCGGATTCGG CCGGCTCGCC 
GTCTATCTCG CCGGCTGCGT GGTCTTCGCT GTCGGCGCCT ATCTGTTCAT CTACTCCAGG 
CTGGGCACCG ATCCCCTGGA CGTTTTCTCG CTCGGGCTCC TGCGGCATGT ACCGCTCACT 
ATCGGCATCG CGCAAACCCT CGTCGCGGTG ATCTGCCTGG GCGCCGTCGC CCTCTGGACG 
CATCAGCGCC CGCTGCTGTC GCCGATCTTC ACCTTCTTCT TCTGTGGCAG CCTGATCGAT 
ATGCTGCGGC TCCTCCAGCC TGCGGATCTT CTCGGCATGG TGCCGATGCC GGCGATGCTG 
CTGGGCACGC TGCTCTGTGC CTATGGCTCC TCGCTGATCA TCATGAGCGG CTTCGGCATC 
CGCGGCATGG ACCTGCTCGC CATCGAGATG ACCGGGCACT GGGGCTTGCC CTTCTGGTTC 
ACCAAGGGCG CGCTGGAGGT CTTGTTGCTG GCATCGGGCT GGCTGATGGG CGGCCCGGTC 
GGGATCGGGA CAATCACATT CCTCCTCGGC GTCAACGGCC TCATCCAGCC GATGATGTGG 
GCCAACGCCC GGCTCCTGCA TCTCAGGAAT TTCGGCCTAC CGCCGCGTGA GGCGCTGCAG 
GAATCGTTGG CGATCTGA
 
Protein sequence
MHSSPLPSQA AGLPGFGRLA VYLAGCVVFA VGAYLFIYSR LGTDPLDVFS LGLLRHVPLT 
IGIAQTLVAV ICLGAVALWT HQRPLLSPIF TFFFCGSLID MLRLLQPADL LGMVPMPAML 
LGTLLCAYGS SLIIMSGFGI RGMDLLAIEM TGHWGLPFWF TKGALEVLLL ASGWLMGGPV 
GIGTITFLLG VNGLIQPMMW ANARLLHLRN FGLPPREALQ ESLAI