| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0867 |
|---|
| Symbol | |
|---|
| ID | 3828425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | - |
|---|
| Start bp | 1007173 |
|---|
| End bp | 1007970 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 20% |
|---|
| IMG OID | 637824016 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_424809 |
|---|
| Protein GI | 83319291 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.546993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAT ATTTATTTTC TGATTTTGAT AATACTTTAA GAAATTCAAA AGTTAAAAAT
AGTTTAAGAA TTGATCAAAA AGATTTAGAT TTTATAAAAG AATTTCAAAA AAATAATAAG
CTAATTGTTT CAACAGGTAG ACCCTATAAA CAACTAAAAG AACATTTATT AAATGAATAT
AATCTAATGC CTGACTATTT TATTGTAAAT ACTGGAGCTA TGATTTGTGA TAATAAAGGA
AGGATTCTTT ACAAAAAAAC TATAGATAAT AAAATAAAAA TTCAATTATT AAATTTTTTA
AAAACTATAG TTAATCAAAT TGATGTAATA GTTTTTGCAA CAAGTGAAAA TGAATCTTTT
TTATTTCATA AAAATTGGTC TAAAGATGTA GAAAAATTCT TTTTTGGTCT TGAAAAATTA
AATAAAACAT TAGATTATTT ATACGATAAA GATTTATTAT GTTTAAAAAT TGAATGTAGT
CAAGAAACTT GAAATAAAAT AGAAGATTTC ATTAATAAAA ATAATTTAGA AGTTAATATT
ACTTTTAATA GTATTAATAA TCGTTTATTT AATGAAATAC ACGCATTTAA AGTAAGTAAA
GGACAAGCAA TTAAAGGTTT GCAAGAAAAA TTAGATATTT CTAGTGATGA TATTATAGTT
GCTGGTGATG ATTATAATGA TATTTCAATG TTTGAAATGT TTTATAAAAA CTCTTATATG
TGCAAACACA AGCATAATGA AAATATTAGA AATAAAGCAA GATATTTAAT AGACAATATT
TGAGAGATTA AGTACTAA
|
|---|
| Protein sequence | MTKYLFSDFD NTLRNSKVKN SLRIDQKDLD FIKEFQKNNK LIVSTGRPYK QLKEHLLNEY
NLMPDYFIVN TGAMICDNKG RILYKKTIDN KIKIQLLNFL KTIVNQIDVI VFATSENESF
LFHKNWSKDV EKFFFGLEKL NKTLDYLYDK DLLCLKIECS QETWNKIEDF INKNNLEVNI
TFNSINNRLF NEIHAFKVSK GQAIKGLQEK LDISSDDIIV AGDDYNDISM FEMFYKNSYM
CKHKHNENIR NKARYLIDNI WEIKY
|
|---|
| |