| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0848 |
|---|
| Symbol | |
|---|
| ID | 3828359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | + |
|---|
| Start bp | 981284 |
|---|
| End bp | 981748 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637823997 |
|---|
| Product | transposase IS1296EH (ORFA), putative |
|---|
| Protein accession | YP_424790 |
|---|
| Protein GI | 83319802 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2963] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.185355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCAA AAGACCTTGA TTTTAAGCTA CAAATTATAG AAGAACATAA AAAAGGAGCT
TCAGTTAAAT CTTTAGCAAG TAAATATGAT ATTGGTATAT GAACAATCAG AGATTGAATT
CATCAATATA ATATGTTTGC CGAACAGGGA ATTAGTAAAA GTGTAGTTCA TACTAAATAT
GATCCAGAGT TTAAACTACA TGTTATTAAC CATAAAAAAG AATATAACTT AAGTTATCCA
GAAACTATAA AACTATTTAG TATTAAAAAT TCTTCAACTG TTGCTTTGTG AGAAAAACAG
TTTAAAGAAA AAGGAATACA AGGATTAAGT AATCAGATCG GCAGACCAAA AAACAGTGCT
AATTCTTATA AACAGCTCTT TTTACAATTA GAAGAAAAAA ATGCTGATTT AGAACAGCAA
ATTGATGAAC TAAAACAGCA ATTAAATATA AAAGATACAA AATAA
|
|---|
| Protein sequence | MLPKDLDFKL QIIEEHKKGA SVKSLASKYD IGIWTIRDWI HQYNMFAEQG ISKSVVHTKY
DPEFKLHVIN HKKEYNLSYP ETIKLFSIKN SSTVALWEKQ FKEKGIQGLS NQIGRPKNSA
NSYKQLFLQL EEKNADLEQQ IDELKQQLNI KDTK
|
|---|
| |