Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCAP_0819 |
Symbol | trmE |
ID | 3828863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
Kingdom | Bacteria |
Replicon accession | NC_007633 |
Strand | - |
Start bp | 946228 |
End bp | 947586 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 4 |
GC content | 24% |
IMG OID | 637823968 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_424766 |
Protein GI | 83319722 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATAA ATGATACAGT AGTTGCCCCT GCTACAAATA TTTCAACTCA AGCTATTGCT TTAATTAGAG TTAGTGGTTC TGAAGCTTTT TTAATAGTTA ACAAACTGAT TAAAGATAAA AAACTAGAAG AAAAAAGAGG ACTATTTTTA AGAAAATTGT ATTTTGAAGA CGAATTAATT GATGAAGTAG TTTTATCTTG TTTTGTTGCT CCTAATTCTT TTACTGGTGA AAATGTTGTT GAAATTGCTT GTCATGGTGG AATTTTAAAT ACTAATAAAA TCATCAATAT TTTAATTCAA TCAGGAGCTA GAATGGCTTT AAGAGGAGAA TTTAGTCAAC GTTCTTTTTT AAATGGAAAA ATTGATTTAA TTCAAGCTGA AGGTATTAAT AATTTAATTC ATGCAAAAAA TGATCTAGCT TTAAAAATTG GTGTTGCTAA TATGAGTGGA TCTAATAATA AAGCAATTAT TGAATTAAAA GATAATTTAT TAGATATTAT TAGTCGTATT CAAGTTTCAA TTGATTATCC TGATTATGAT GATGTTGAAG GATCAAGTAT AGAAGATTTA ACTAATTTAT TAGAAATTAT TAATGATCAA ATTAATAAAC TTTTAATGAG ATCTAAAATG GCTTTTAAAA ACTCTGAAGG AATCAAAACT GCTATTGTTG GTCAAACTAA TGTTGGTAAA TCATCAATTT TAAATGCTTT AATTAATGAA GACAAAGCAA TTGTTACAGA TATTCCAGGA ACTACTAGAG ATATAGTTGA AGGACAAATT AATTTAGAAA ATGTTAGTTT AAATTTAATT GATACAGCCG GAATTAGAAA AACTAGTGAT GTTGTTGAAA ATTTAGGAAT TTTAAAATCT AAAAACTTAA TCAATGAAGC TGATTTAGTT TTATTTGTTG TTAATAAAGA AAATATTAAT GATTTAGATA ATCAAGAAAT TTTTGAACTT TTAAAAGATA AAACTTATAT TTTGATTGTA AATAAGGCTG AAAAACTAAG TCAAACTGAA AAACAAAACT TAGAAAAAAA ATATGAAAAT ATTGTATTTA CTAGTGCTAT AAATCACGAT ATAGATCAAT TAGTTTTAAG AATTAATCAA ATGTATTTAA ATGAAGAGAT TAGTAAAAGT GATGAATTAA TTTTAATTGG ATTAAATCAA ATTACTTTAG TTGAACAAAT TAAAAACAAG CTTTCAACTG CTTTAAGCGT AATTAAATCA GGAATGCCAA TTGATATAGT AAATGTTGAT TTATATGATG CTTGAAATTT ATTAAATGAA CTAATTGGTG TTGAGTATGA AGATGAAATT ATTGATAATA TCTTTAGAAA ATATTGTTTA GGAAAATAA
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Protein sequence | MLINDTVVAP ATNISTQAIA LIRVSGSEAF LIVNKLIKDK KLEEKRGLFL RKLYFEDELI DEVVLSCFVA PNSFTGENVV EIACHGGILN TNKIINILIQ SGARMALRGE FSQRSFLNGK IDLIQAEGIN NLIHAKNDLA LKIGVANMSG SNNKAIIELK DNLLDIISRI QVSIDYPDYD DVEGSSIEDL TNLLEIINDQ INKLLMRSKM AFKNSEGIKT AIVGQTNVGK SSILNALINE DKAIVTDIPG TTRDIVEGQI NLENVSLNLI DTAGIRKTSD VVENLGILKS KNLINEADLV LFVVNKENIN DLDNQEIFEL LKDKTYILIV NKAEKLSQTE KQNLEKKYEN IVFTSAINHD IDQLVLRINQ MYLNEEISKS DELILIGLNQ ITLVEQIKNK LSTALSVIKS GMPIDIVNVD LYDAWNLLNE LIGVEYEDEI IDNIFRKYCL GK
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