| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0714 |
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| Symbol | |
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| ID | 3828946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007633 |
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| Strand | - |
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| Start bp | 829755 |
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| End bp | 830663 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 4 |
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| GC content | 19% |
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| IMG OID | 637823866 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_424674 |
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| Protein GI | 83319852 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.13188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAT TTATTGTTAA TAAAAATGAT CAAAATCAAA CTTTATTTAA ATTTTTAAAA
AAAACTTTTA AAACTACTCC TATAAGTGTT ATTTATAAGT GAATAAGAAA TAAGTCCATT
AAGATAAACT CTAAAAGAGT TAATGACAAA AATTATTTAT TAAAAATAAA TGATGTTGTT
GAAGTGTATG ATTCAAATAA ACCAATAATT AGAGATCAGT TTAACTATAT TAGTAATGTT
AATTTAGATA TTGTTTATGA AGATAATAAT ATTTTAATAG TTAATAAACC TAATAATTTA
GAAATGCATT CAATTTATAA TTTGTGTTTA GATGATATGG TTAAATCTTA TTTAGTAGAT
AAAAAAGAAT ATGATATTTA TTTAGAAAAT TCTTTTGTAA TTTCTCATGT TCATCGTTTA
GATAAACTAA CTAGTGGTTT AGTAATTTAT GCTAAAAACA AAATTAGTTC AATTATTTTA
ACTAATGCTT TTAAAACAAA AGATCAAATT AATAAGTATT ATTATGCACT AACTAGTTAT
GATTGAAATT TAAATGACTT TTTACAAGTT AATGGTTATA TTAACTATAA TAGTAATACT
CAAAAAGCTG ATTTTAGTTT AGTTGAAAAA AATAATTATA AATATTGCCA AACTGAGTTT
AAACTAGTTA ATAAAAATTT AATTTTAGTA AAATTAATAA CAGGTAAAAA ACACCAAATT
AGAAGTGTAT TAAGTTTTTA TAATAATCCT ATTTTAAATG ATTTTAGATA TAATGGTAAA
AAAGAAAATG ATCAAAAAAT GATCTATTTA GCAGCTTTTA AAATTGAATT TAAAAGCTTA
AAAAAGCCTT TAGATTATTT AAATAATAAA GTGATTATAA AAAACCCAGA TTGAATTAGT
AGGAGGTAA
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| Protein sequence | MTKFIVNKND QNQTLFKFLK KTFKTTPISV IYKWIRNKSI KINSKRVNDK NYLLKINDVV
EVYDSNKPII RDQFNYISNV NLDIVYEDNN ILIVNKPNNL EMHSIYNLCL DDMVKSYLVD
KKEYDIYLEN SFVISHVHRL DKLTSGLVIY AKNKISSIIL TNAFKTKDQI NKYYYALTSY
DWNLNDFLQV NGYINYNSNT QKADFSLVEK NNYKYCQTEF KLVNKNLILV KLITGKKHQI
RSVLSFYNNP ILNDFRYNGK KENDQKMIYL AAFKIEFKSL KKPLDYLNNK VIIKNPDWIS
RR
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